Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2751 ATGGACGGAGAGATTGAGAGCACAAACAGTGTACTCTACCGAACACTCTTTGTTACTGTTGCAAAGATAAAATATAGACGTGAGCGTTGGAACACTTCACGGACGGAGAGATTGAGATTTGAGCAGCACACACAGAGTGATGGTATACCTgggattaggaataattataaaggTTACGGTAGTTCTTATCATTTTCCAGGATTACTGAACCTTTTAAGCATGAGCAAGCATAGCCAAATCTTAAGAGAAGATAATAACTCGGATGCTTCCTATATAGAACTAAGCCTTGAAGAGGCTGCATTGGCAAGAGCGCCAAGTGAGGGATGCGAAGAGGAAGTTGGGAAGACTTCTAGACAACAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCAGCTGTTAGAAGAGGTGAAGACTCATGGTTTCTGGAAATGAGCGTTGGTGGTCTTGTGAGTGGTCTTTTAGGTGTGAAGGGGTTTGAGGTGAGTTGGATTGGCTGGGCTGGTGTCAATGTGCCAGATGAGATTGGACAGGAGGCACTTACTAAAGCTTTGGCTGAAAAGGTTCGAAGTCTTGGTCTCTTGCTTGATACTTATGTTGTGAGTTGTATTCCGGTATTTCTTGATGAAGAGACTGTTCATCAATACTATAATGGCTACTGTAATAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACATGAAGACCGCCTTGACACGACACGGAGTTTCCAGTCTCAGTTTGCAGCATATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAACGAGCACTATCAAGAGGGTGATGTTGTTTGGTGCAATGATTACCATCTGATGTTACTTCCAAAATGCTTAAAGGAGTCTAACAGCAAAATGAAAGTTGGCTGGTTTCTCCACACACCATTTCCATCTTCAGAAATTCATAGGATGCTGCCATCTCGTTCAGAGCTTCTGCATTCTGTTCTTGCAGCTGATTTAATTGGTTTTCACACCTATGATTATGCACGGCATTTTGTTAGCGCTTGTACTCGTATCCTTGGGCTTGAGGGAACGCCTAAAGGGGTTCAGGATCAAGGGAGGCTGACTCGAGTTGCTGCATTTCCAATGGGGATAGACTCAAATCGATTCCTACGTGCACTTGAGCTTCCTAAAGTTCAGGATGTCatcaaagaaatagaaaaaagattTGAAGGCAGAAAGGTAATGTTAGGCATTGATCGCCTTGATATGATTAAGGGAATTCCTCAGAAATTACTagcatttgaaaattttctggaaGAAAATGCTTATTGGCGTGATAAAGTAGTTTTGGTTCAAATTGCTGTGCCAACAAGAGCAGATGTTCTTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATGGTTGCTCGCATTAATGGAAGATTCGGAACATTGACTGCTCTTCCTATAAATCACATGGATCGCTCTCTTGGCTTTCATGAACTATGTGCTTTATACGCTGTAACAGATGTAGCCCTAATCACATCTTTGAGGGATGGGATGAATCTTGTCGGTTACGAATATGTGGCCTGCCAGGAGAGGAAGAAAGGGGTTCTCATTCTTAGTGAaTTTGCTGGTGCTGCGCAGTCTCTAGGTGCTGGAGCGATTCTAGTTAACCCCTGGAACATCACAGAAGTTGCTGCTGCAATTACCCAGGCTCTGAATATGCAATCTGGGGAAAGAGAGAAGCGCCATAAACTGAACTTCTCACATGTAAAAACCCACACTTCTCAGAAATGGGCAGAAACTTTTGTGAGcGAACTAAATGATACTGTTGTTCAACAACAACTAAGGACAAGACAAGTTCCACCCCCCCTTCCAACCGAGAGAGCAATTGAATCTTATCTCATGTCTACTAATCGATTGATCATCTTGGGATTCAATGCAACTTTAACTGAACCAGTCGAGAAAAAGGGTGATCAGATTAAAGGAATGGAACTTAAGGTGCATCCAGAATTGAAACGATCATTGACAGAACTTTGCAGTGACCCAAAGAACACAGTTGTTGTTCTTAGTGGAAGTGATAGAACAGTCCTAGAGGAGAATTTTAGGGAGTATGACGTGTGGTTGGCCGCAGAGAATGGTATGTTTTTACGCCCTGCAAAGGGAGAGTGGATGACAACAATGCCAGATATTCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTCTTGAGTATTTTACAGAAAGAACACCCCGGTCACATTTTGAAGAACGAGAAACCACTCTTGTCTGGAATTACAAATATGCAGAAGTTGAATTTGGAAGACTTCAAGCAAGGGACATGCTTCAGCATCTCTGGTCAGGTCCAATCTCTAATGCACCTGTTGATATTATTCAAGGTAGCCGATCTGTTGAATTGCGGGCTGTTGGTATTACAAAGGGAGCAGCTATTGACCGCATCTTGGGTGAGATAGCATACAGTAAATTCATGACATCGCCAATTGATTATGTCCTGTGTATAGGACATTATCTGGATGAAGATGTTTTTACCTTTTTTGAGCCAGCACTTCCTTCTTTTGATCCATTCCTTCCAAGATCAAAGGTAACAGACAGTGTTAAGTTTCTTGCTGAAGAGAGATTATCGAAAACTCCATCCAGAAAGAGTGGACCAAAGTCGCCTCAAAAGAAAACCGAAAATAGTATATGTATTTCACCACCTTGTCCAGCATTTGAAAAGACGTCATGGAATATTATTGACCTTAAGAAAGAGAATTACTTCTCCTGTACTGTAGGAAGAACTCAATCCTATGCTCGGTATATGCTTGGATCATCTTCTGATGTTGTTGCATTTCTGAAGGATCTAGCGGATGCATCTTTAAACTCTCTATCTTCGAATCAAAATGCTTCGACGTCTTGCAGAAACACTGAAGAAATTAGTTTGCAATCAGGGATCCCTGACTGGGTGACCATGGTGAAGTGA 2955 0.4146 MDGEIESTNSVLYRTLFVTVAKIKYRRERWNTSRTERLRFEQHTQSDGIPGIRNNYKGYGSSYHFPGLLNLLSMSKHSQILREDNNSDASYIELSLEEAALARAPSEGCEEEVGKTSRQQRLLVVANRLPVSAVRRGEDSWFLEMSVGGLVSGLLGVKGFEVSWIGWAGVNVPDEIGQEALTKALAEKVRSLGLLLDTYVVSCIPVFLDEETVHQYYNGYCNNILWPLFHYLGLPHEDRLDTTRSFQSQFAAYKKANQMFADVVNEHYQEGDVVWCNDYHLMLLPKCLKESNSKMKVGWFLHTPFPSSEIHRMLPSRSELLHSVLAADLIGFHTYDYARHFVSACTRILGLEGTPKGVQDQGRLTRVAAFPMGIDSNRFLRALELPKVQDVIKEIEKRFEGRKVMLGIDRLDMIKGIPQKLLAFENFLEENAYWRDKVVLVQIAVPTRADVLEYQKLTSQVHEMVARINGRFGTLTALPINHMDRSLGFHELCALYAVTDVALITSLRDGMNLVGYEYVACQERKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAITQALNMQSGEREKRHKLNFSHVKTHTSQKWAETFVSELNDTVVQQQLRTRQVPPPLPTERAIESYLMSTNRLIILGFNATLTEPVEKKGDQIKGMELKVHPELKRSLTELCSDPKNTVVVLSGSDRTVLEENFREYDVWLAAENGMFLRPAKGEWMTTMPDILNMEWVDSVKHVLEYFTERTPRSHFEERETTLVWNYKYAEVEFGRLQARDMLQHLWSGPISNAPVDIIQGSRSVELRAVGITKGAAIDRILGEIAYSKFMTSPIDYVLCIGHYLDEDVFTFFEPALPSFDPFLPRSKVTDSVKFLAEERLSKTPSRKSGPKSPQKKTENSICISPPCPAFEKTSWNIIDLKKENYFSCTVGRTQSYARYMLGSSSDVVAFLKDLADASLNSLSSNQNASTSCRNTEEISLQSGIPDWVTMVK 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2751 984 Gene3D Glycogen Phosphorylase B; 381 584 - -
Sto4g2751 984 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 74 946 IPR001830 GO:0003824|GO:0005992
Sto4g2751 984 Pfam Trehalose-phosphatase 655 847 IPR003337 GO:0003824|GO:0005992
Sto4g2751 984 CDD HAD_TPP 632 846 - -
Sto4g2751 984 CDD GT20_TPS 121 599 IPR001830 GO:0003824|GO:0005992
Sto4g2751 984 Gene3D - 721 801 - -
Sto4g2751 984 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 120 602 - -
Sto4g2751 984 Gene3D Glycogen Phosphorylase B; 113 380 - -
Sto4g2751 984 SUPERFAMILY HAD-like 631 947 IPR036412 -
Sto4g2751 984 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 121 599 IPR012766 GO:0003825|GO:0005992
Sto4g2751 984 MobiDBLite consensus disorder prediction 872 892 - -
Sto4g2751 984 Pfam Glycosyltransferase family 20 121 599 IPR001830 GO:0003824|GO:0005992
Sto4g2751 984 Gene3D - 656 842 IPR023214 -
Sto4g2751 984 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 74 946 - -
Sto4g2751 984 MobiDBLite consensus disorder prediction 878 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2751 Sto-Chr4 28478893 28490032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2751 81 950 Trehalose Biosynthesis Gene Families AT1G78580 71.667 0.0 1319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2751 K16055 - gmx:100797320 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0125 7 950886 961217 Sto4g2751 4 28478893 28490032 ECH
Sto4g2751 4 28478893 28490032 Sto4g2751 4 28478893 28490032 ECH