Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2746 ATGTTCTCTTCTCTCTCCAGAGCAGTAGCTTCTCGGAGGCATATCGTCAACGCCATCTCTCCATCCACACTTCAGGATCTGCTTTCTGTACAAACCCAATGGTTGTCTCTGAGGTACTCTACTTCAATCCCCTCAAATCGGCCTTCTTTTACTGTTTCATATCTCGTTGATACATTCGGGTTTTCATTCGACGACGCTACTTCAATCTCCAAGTATGTCAACCTCGAAACGCGAGAAAAACCAGATTTGGTGGTGTCGTTTTTGAAGAACCAAGGGTTCTCGCATGCCCAGATTGTTCGTTTCATAAGAGAAGTCCCCGTGTGTCTTCGATTTGATCCTGTGAAAACCTTTCTGCCTAAGATTGAGTTTTTCAAATCCAAAGGCGTTTCGAGCTCAGACATCCCTAAGGTCATATCTAGTTGCCCTAACATAATGAAAAGAAGCTTAAGCAAACAAATCGAACCTTCCTTTGATTTCTTTCGAAATTTGGTGAAGTCTGATGACATGTTCGTTAATATTGTTAAGGAATACTCGGGCATTCTTCTTGATATTAACACCCATGCTGTGCCAAATTTGAAGGTATTAAGAGAAGTAGGAGTTCCTGAATCAAATATTATCAAATTGTTAAAAACATTTCCCAGGGCATTAACTAAAGTTCCTCCTCGATTTAAGGAGATTGTGGAGgaagtgaagaaattggggtttcatCCTTCGAGTACACTATTTGTTTGGGCTGTTTATACATTGACTTCATTAAGCAAATCCACTTGGGCAAAAAAGTCAGAAGCTTATAAAAAGTGGGGTTGGTCTGACAATGACATTCTTTTAGCAGTTAGAAGGTTTCCTTTCTGTATGAAGATATCAGAGGATAAGATTGATGTAACAATGGAGTTTCTTGTTAACAATATGGGCTGTGAATCTTCTGCTGTTCTCCGATATCCACAAATTCTGTCATTAAGTTTGAACAAGCGAATTGTTCCAAGGGCTTCTGTTTTTCAAGTTTTGTTGTCAAAGGGACTGGTCAAGCAGAAAAGCTCACTTGCAATATTCGTCTATACTGAGACGATCTTTATGAATAGGGCGAATGAAGAATAG 1095 0.3881 MFSSLSRAVASRRHIVNAISPSTLQDLLSVQTQWLSLRYSTSIPSNRPSFTVSYLVDTFGFSFDDATSISKYVNLETREKPDLVVSFLKNQGFSHAQIVRFIREVPVCLRFDPVKTFLPKIEFFKSKGVSSSDIPKVISSCPNIMKRSLSKQIEPSFDFFRNLVKSDDMFVNIVKEYSGILLDINTHAVPNLKVLREVGVPESNIIKLLKTFPRALTKVPPRFKEIVEEVKKLGFHPSSTLFVWAVYTLTSLSKSTWAKKSEAYKKWGWSDNDILLAVRRFPFCMKISEDKIDVTMEFLVNNMGCESSAVLRYPQILSLSLNKRIVPRASVFQVLLSKGLVKQKSSLAIFVYTETIFMNRANEE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2746 364 SMART mt_12 171 201 IPR003690 GO:0003690|GO:0006355
Sto4g2746 364 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Sto4g2746 364 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Sto4g2746 364 SMART mt_12 206 236 IPR003690 GO:0003690|GO:0006355
Sto4g2746 364 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Sto4g2746 364 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Sto4g2746 364 SMART mt_12 25 62 IPR003690 GO:0003690|GO:0006355
Sto4g2746 364 Gene3D Transcription termination factor 3, mitochondrial 171 363 IPR038538 -
Sto4g2746 364 Pfam mTERF 251 350 IPR003690 GO:0003690|GO:0006355
Sto4g2746 364 Pfam mTERF 85 236 IPR003690 GO:0003690|GO:0006355
Sto4g2746 364 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 32 361 - -
Sto4g2746 364 PANTHER CGI-12 PROTEIN-RELATED 32 361 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2746 Sto-Chr4 28432900 28434073 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto4g2746 mTERF 6.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2746 K15032 - qsu:112020620 325.865