Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2745 ATGCTGGTCAGCTTCATGGAGATGCCTAAAGGGTATCGATTTTTTCCTACGGATGGGGAATTAATCTCCCACTGCTTGGTTAACAAATTGCTTGATAGGGAAGAACCAATTCACAAGAATATCATTAAAGAGATTGATGTCTATAGCTATGATCCTCATCAGCTTCCTCTTTGTGAGAGTGAATGGACAAATGAGAAGGAGGAATATTACTTAACCATCACGGAGCCAGTCGTATTAAGAAGCTCAGGTTCAGGTTCAGGCTCAGGCTCAGGCTCAACCACAAACACCAATACAATTCGTCCAACTCAACATGGATATTGGAAGCAGTACGGAGATGATGAGATTGTAATTCATAAGCAACAAATTGTTggatttaaaaaaacatttgtgTTCTATATGGAAAACTCACAGAATGAAGATCAAACTAAGTGGATCCTAAGTGAGTGTAGGCTTCTCCCATCTGGATTACCACAAGGAACTTCTGATTCATCCCTACTTGACAAGATGCAGAGAATTGCAGTGTGTAGACTTAGAAAACggaaattttttaaagatgatTCCTCTATTGCTGAAGAATATGAAGATGAAGAATATGAACCAAAAATGAGCTGGCACAGCTCACAAATGAAATAA 633 0.3728 MLVSFMEMPKGYRFFPTDGELISHCLVNKLLDREEPIHKNIIKEIDVYSYDPHQLPLCESEWTNEKEEYYLTITEPVVLRSSGSGSGSGSGSTTNTNTIRPTQHGYWKQYGDDEIVIHKQQIVGFKKTFVFYMENSQNEDQTKWILSECRLLPSGLPQGTSDSSLLDKMQRIAVCRLRKRKFFKDDSSIAEEYEDEEYEPKMSWHSSQMK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2745 210 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 188 - -
Sto4g2745 210 Pfam No apical meristem (NAM) protein 9 150 IPR003441 GO:0003677|GO:0006355
Sto4g2745 210 SUPERFAMILY NAC domain 4 179 IPR036093 GO:0003677|GO:0006355
Sto4g2745 210 Gene3D NAC domain 17 183 IPR036093 GO:0003677|GO:0006355
Sto4g2745 210 ProSiteProfiles NAC domain profile. 8 180 IPR003441 GO:0003677|GO:0006355
Sto4g2745 210 MobiDBLite consensus disorder prediction 81 103 - -
Sto4g2745 210 PANTHER NAC DOMAIN-CONTAINING PROTEIN 6 8 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2745 Sto-Chr4 28425004 28428535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2745 2 209 NAC Transcription Factor Family AT1G62700 28.910 4.58e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g2745 NAM 4.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2745 - - twl:119983097 109.383