Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2744 ATGGATGCGCCCGAAGGATATCGCTTCGTTCCGTCCGATGGTGAGTTGGTCTCACATTGTTTGGTGAACAAGCTGCTGAACAGGGAAGAACCCATCCATAGGGACATTATCAGGGAAGTCGACGTTTATCGATTCGATCCCAATCTGCTTCCTCTTTATGAAAGGCGGTGGTCCAGTGAGAAAGAGGAGTACTATTTCACAACGGTGGATCCTGCAGTAGTAAGAAGGATTCCAGACGAAGCATCCTTAATCACAATCCGCCGAACCCAGAACGGATACTGGAAGGAGCATGGAGAAAGCGAGCTGGTGACTCGTGGACAAAACATTGTTGGCTTCAAAAGGAACTTGGTCTACTACATCGGAAGCCCACCAAATGGAGTCCAAACTAAGTGGTCCCTATGCGAGTGCTGGCTCCTCCCTTCTGGACTGCCTGAGCGATATCGTAATCGCCCACAACTACTTGACAGGAGGCTTGCTGTGGTCAGACTTAGGAAGAGGAAGTTCTTTGTGGATGACCTTCCTGCTGCTGCACAGTATCGTCATGAAGATGAATTTGGAGAGTATGAACCGAAAGTGAATTGGCACAGGGAAAACTAA 597 0.4874 MDAPEGYRFVPSDGELVSHCLVNKLLNREEPIHRDIIREVDVYRFDPNLLPLYERRWSSEKEEYYFTTVDPAVVRRIPDEASLITIRRTQNGYWKEHGESELVTRGQNIVGFKRNLVYYIGSPPNGVQTKWSLCECWLLPSGLPERYRNRPQLLDRRLAVVRLRKRKFFVDDLPAAAQYRHEDEFGEYEPKVNWHREN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2744 198 PANTHER NAC DOMAIN-CONTAINING PROTEIN 6 3 155 - -
Sto4g2744 198 SUPERFAMILY NAC domain 3 144 IPR036093 GO:0003677|GO:0006355
Sto4g2744 198 ProSiteProfiles NAC domain profile. 3 166 IPR003441 GO:0003677|GO:0006355
Sto4g2744 198 Pfam No apical meristem (NAM) protein 4 134 IPR003441 GO:0003677|GO:0006355
Sto4g2744 198 Gene3D NAC domain 12 169 IPR036093 GO:0003677|GO:0006355
Sto4g2744 198 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2744 Sto-Chr4 28406409 28407533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2744 4 173 NAC Transcription Factor Family AT1G69490 34.066 2.48e-21 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g2744 NAM 8.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2744 - - cit:102627678 92.8189