Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2711 ATGTCTACTTTTGTTTTCCCTGGTGGATTTCGATTCATCCCAAAAGATGAAGAATTGATTCAGTATTATCTTTTCAACAAAATAACAGGAATGCCACTACCCGAGGGTGTGGTTTTGGAGTGTGATCTCTACGGTAGTGAGAACCCATGGGAGATCTGGCAACGCTATAGCCACAAGGTGGTTAAGTGGGAAGAGGGAGAAGATCTTTACTTCTTCACAACCCTAAAGAAGAAGAGTTCACGTCGGATTGAGAGGAGTGTTGGTATAGGAAGATGGGAGGGAGAAGGCGGTTCAGATATCAACATCCAAATACAGGAAAAGTTATTGGGTGTGTCAAGAGATTGCGTTTTGAGAAGAGTCAAACTCATCAAGATGCTTCATAATTATGTCCTTTGTCGGataaggaagaacaagagaatcATTAAAGATAAGAGGTCGACTAATACGAATTCAACTCAAATAAGTTCTAAGAGACTGAAGAAAGATAGTGCTTTGAAGAACATGGGGTCGTGTGATGTTTCATCACTCCCTTCCTTCCAATATGAAAATAGTGAATTTTCATCCCTTATTTCTATAGAGGAGGAGGACATTGATGGATATATTTCTTATatcgaaaattatttaaatgatcaaCCCCATGACAGTACTATTATATTAAATCCACAATTGGAAGACCATCAGAATGGAGATCAAAATATTTTGAAGAATGACCCAGTTACAACACCAGTTTCAATGGATGGTCAAGAAGGGGATGATGAATTTGCTTTGTATTTACAAAATTCTTTGACTGATTTAAAGCCTGCAGACTATACTTTGACAGATTAA 825 0.3636 MSTFVFPGGFRFIPKDEELIQYYLFNKITGMPLPEGVVLECDLYGSENPWEIWQRYSHKVVKWEEGEDLYFFTTLKKKSSRRIERSVGIGRWEGEGGSDINIQIQEKLLGVSRDCVLRRVKLIKMLHNYVLCRIRKNKRIIKDKRSTNTNSTQISSKRLKKDSALKNMGSCDVSSLPSFQYENSEFSSLISIEEEDIDGYISYIENYLNDQPHDSTIILNPQLEDHQNGDQNILKNDPVTTPVSMDGQEGDDEFALYLQNSLTDLKPADYTLTD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2711 274 SUPERFAMILY NAC domain 4 136 IPR036093 GO:0003677|GO:0006355
Sto4g2711 274 Gene3D NAC domain 15 124 IPR036093 GO:0003677|GO:0006355
Sto4g2711 274 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 225 - -
Sto4g2711 274 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Sto4g2711 274 Pfam No apical meristem (NAM) protein 7 117 IPR003441 GO:0003677|GO:0006355
Sto4g2711 274 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 7 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2711 Sto-Chr4 28177550 28178433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2711 6 199 NAC Transcription Factor Family AT1G77450 24.545 1.72e-15 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g2711 NAM 1.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2711 - K14964 pvy:116117689 104.375