Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2695 ATGGATGCAGTTGCGCCGAATTCTGCGGCGGCAAATGTGAATTCTCCGCCGCCATTCCTCAGTAAGACTTACGACATGGTCGATGGCCCGTCCACCAACTCGGTGGTGTCGTGGAGTGATAACGGCAACAGCTTTGTTGTTTGGAATGTGCCAGAGTTTGCGAGAGACATATTGCCCAAAGGAAAAGAGAATTCTAGGACAAAATTGGGTGAAGAGATAGATCATGGAATTGAACCTGGTGAGCACCTGGATGAAGGGCCTCGTATCAGTACCTTTGTCTATATATATCATGGAGCTTCAGCTCTTTCTCTTAGTGCTCTACTGGCTACTGCTCTTTGTCAGACACCTTCATTGGGTATGCTCTACTTTGGATTCAGAAAGGTTGATCCAGATCGCTGGGAATTTGCAAATGAAGGATTTTTAAGGGGTCAAAAACATCTTTTGAAAAGTATCAGTAGGCGGAAACCTGCCCAATTAAATGGTAATCAACAACCATCTCTGGTTCAGAACTCACCTGCTGGGGCATTTATTGAAGTGGGCAAGTTTGGGCTTGAGGAAGAGGTTGAAAGATTGCAAAGGGATAAGAATGTTCTTATGCAAGAACTTGTTAGGTTAAGACAACAACAGCAAGCAACTGATAACCAATTGCAAAGTGTTGGGCAACGTGTGCAGGTGATGGAGCAGCGTCAACAACAGATGATGTCATTTCTTGCAAAGGCCATGCAAAGTCCAGGCTTTTTGGCACAGTTTGTACAGCAGCAGAGTGACAGTAACAGACATATAATTGGAGGCAATAAAAAGAGGAGACTCCACCGGCAGGAAGAAGATACTTTAGCCTCTGAACATCTCCATAATTCTCTTGATGGACGATTTGTTAAGTTTCAGCCTTCTATGAATGAGGCTGCAAAAGCATTATTGCGTCAGATACTGCAAATGAATGCTTCTGGAAGGATGGCATCATCATTAAATAACCCTGATGCTTTCCTTATTGATAATGTTCCTTCAGCCATTGCATTAGATAGTAGGAGTTCTTCTAGTCGGGCTTCAGGAGTGACCCTTTCCGAGGTTCCTCCTCCTACTTCTGGCCACTCTTATATGGCAGCAGTGCAATCACAATTTCCTATTAATTGTGTTCCGAATAGCATACCTGAGATGCAGTCTTCCAGTGCTGTGTTGACTGACGCTGTCAAAGCAGCTGAATTTCCAGAATTAAATTTGCATAATTGCCCGGAaagtgttttggattttggtAAAGTTCAAGGAGTGGAGAGAGAAAGCAGTCTGTTGAATCCTGAACTGAGTTTTGCGGAGCCTGACGCTGGGGACATTGACATGATGTCAGCAGTTTTGGATGGGACGCAACCTGTGGAAATAGAAGCTGATGCTTTTTCGCCTGATCCAGATGGAATTTCTAAGCTCCCAAGCATTAGTGATGTTTTCTGGGAGCAGTTCCTCACAGCTAGTCCACTTACGGGAGATACAGATGAAATTAGTTCTTGTGCCATTGGAGATGGTTTAACCGAAGACCAGGAATCTCCATCTGAAAAGGAGAGTGGAGGGGGAGATATGGATAAGATAAAGCATATGGACCATATTACTCAACAGCTGGGACTCCTTGCATCAGAGTCCTCTTAA 1635 0.4385 MDAVAPNSAAANVNSPPPFLSKTYDMVDGPSTNSVVSWSDNGNSFVVWNVPEFARDILPKGKENSRTKLGEEIDHGIEPGEHLDEGPRISTFVYIYHGASALSLSALLATALCQTPSLGMLYFGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAQLNGNQQPSLVQNSPAGAFIEVGKFGLEEEVERLQRDKNVLMQELVRLRQQQQATDNQLQSVGQRVQVMEQRQQQMMSFLAKAMQSPGFLAQFVQQQSDSNRHIIGGNKKRRLHRQEEDTLASEHLHNSLDGRFVKFQPSMNEAAKALLRQILQMNASGRMASSLNNPDAFLIDNVPSAIALDSRSSSSRASGVTLSEVPPPTSGHSYMAAVQSQFPINCVPNSIPEMQSSSAVLTDAVKAAEFPELNLHNCPESVLDFGKVQGVERESSLLNPELSFAEPDAGDIDMMSAVLDGTQPVEIEADAFSPDPDGISKLPSISDVFWEQFLTASPLTGDTDEISSCAIGDGLTEDQESPSEKESGGGDMDKIKHMDHITQQLGLLASESS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2695 544 Coils Coil 181 208 - -
Sto4g2695 544 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 60 IPR027725 -
Sto4g2695 544 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 123 519 IPR027725 -
Sto4g2695 544 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE 7 60 - -
Sto4g2695 544 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE 123 519 - -
Sto4g2695 544 Pfam HSF-type DNA-binding 19 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto4g2695 544 Gene3D - 11 155 IPR036388 -
Sto4g2695 544 SUPERFAMILY "Winged helix" DNA-binding domain 14 60 IPR036390 -
Sto4g2695 544 MobiDBLite consensus disorder prediction 495 544 - -
Sto4g2695 544 MobiDBLite consensus disorder prediction 509 531 - -
Sto4g2695 544 SMART hsfneu3 15 154 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2695 Sto-Chr4 28070185 28073851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2695 13 543 HSF AT5G16820 45.956 5.49e-128 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Sto4g2695 HSF_DNA-bind 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2695 K09419 - pvy:116134854 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2695 4 28070185 28073851 Sto4g2695 4 28070185 28073851 ECH