Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2678 ATGGAAAATCTGATCCTTCCAGGTTCAGGATCCAAATCCGTGAATCTAGCTGTAACGCTTATAGATCGTCGGCGTCTTGCACAGCCGCGCACTCTTCGTCCACCACCGGGGAACGCACCGCAGTCGATTGATCCAGGGGAGAGCTTGGCCGTCAAAACGGAATTATCAGGAAACAACAATCAAGAAGGAACCACCGCGGCTAACTTCACCTCGCACCACCTGGAAACTTGCAGCATGGAAGAATGTGAAACGCACTCCACTTCTTTCACTTGGCTAACAACTGgaaattttaagaataatggAATTCAAGCATTTATTTATGGAATCAAGAGTGGGAAATCAAGTGATAGTTGCACTTATAGCATGGATGCATTCAATTTCGCATCAGTATGTGCACACGCTGCAGAGAAACAATTAGCCTATCATGTTTATGGACACATGCTTGCTGGACATTTGCTTATGAAGAAGGCAAGCAAGCATTTTTGGAGGAGCAAAGCAAAAAGCAAAAAAGGGAGAAGGAGTGTTACACTACTTGACATAAAGCTGACGGACAGAGCCAACCGGCAACAGAGCCAGTTGCGGAGCCAACCGGCAACGGAGCCAAACAGAGCCAGTTGCGGAGCCAACAAGCAACAGAGCCACTGGCGGAGCCAACCGGCAACGGAGCCAAACGAAGCCAGTTGCGGAGCCAACCGGCAACGGAGCCAAACAGAGCCAGTTGCGGAGCCAACGGGCAACGGAGCCAAACGAGGCCAGTTGCGGAGCCAACCGGCAACGGAGCCAAACAGAGCCAGTTGCGGAGCCAACCGGCAACGGAGCCAAACGAAGCCAGATTATTACAAAGTGTTGGAGGTTGATTATGATGCAACtgaagaaaatatcaaattaaattaccGAAGGCTTGCACTGAAATGGCATCCTGACAAGCACAAAGATGACAGTGCTATTACTGCAAAATTCCAAGAGATCAATGAGGCTTACAGTGTGTTGAGCGATCCTGCCAAACGTTTTGAATATGATTCAACTGGAATCTATGAGATTGACAAGTATAGTTTGCAGGAAACATTTTATTACAACACAGGAATATCTTGCCAGATTCAAAGGGATGATACTTACCTGCAATGGACTGGGTATCGATACCACTCAAATATGATGGTGGGTGTATCTAAGTCTCATTCTGATTTCTGA 1188 0.4621 MENLILPGSGSKSVNLAVTLIDRRRLAQPRTLRPPPGNAPQSIDPGESLAVKTELSGNNNQEGTTAANFTSHHLETCSMEECETHSTSFTWLTTGNFKNNGIQAFIYGIKSGKSSDSCTYSMDAFNFASVCAHAAEKQLAYHVYGHMLAGHLLMKKASKHFWRSKAKSKKGRRSVTLLDIKLTDRANRQQSQLRSQPATEPNRASCGANKQQSHWRSQPATEPNEASCGANRQRSQTEPVAEPTGNGAKRGQLRSQPATEPNRASCGANRQRSQTKPDYYKVLEVDYDATEENIKLNYRRLALKWHPDKHKDDSAITAKFQEINEAYSVLSDPAKRFEYDSTGIYEIDKYSLQETFYYNTGISCQIQRDDTYLQWTGYRYHSNMMVGVSKSHSDF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2678 395 MobiDBLite consensus disorder prediction 173 273 - -
Sto4g2678 395 MobiDBLite consensus disorder prediction 183 242 - -
Sto4g2678 395 Pfam DnaJ domain 278 340 IPR001623 -
Sto4g2678 395 SUPERFAMILY Chaperone J-domain 275 357 IPR036869 -
Sto4g2678 395 PANTHER DNAJ PROTEIN-LIKE 271 355 - -
Sto4g2678 395 MobiDBLite consensus disorder prediction 249 273 - -
Sto4g2678 395 Gene3D DnaJ domain 263 361 IPR036869 -
Sto4g2678 395 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 271 355 - -
Sto4g2678 395 SMART dnaj_3 277 335 IPR001623 -
Sto4g2678 395 ProSiteProfiles dnaJ domain profile. 278 343 IPR001623 -
Sto4g2678 395 PRINTS DnaJ domain signature 280 298 IPR001623 -
Sto4g2678 395 PRINTS DnaJ domain signature 298 313 IPR001623 -
Sto4g2678 395 PRINTS DnaJ domain signature 315 335 IPR001623 -
Sto4g2678 395 PRINTS DnaJ domain signature 335 354 IPR001623 -
Sto4g2678 395 CDD DnaJ 278 332 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2678 Sto-Chr4 27926451 27939756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2678 279 341 C2H2 Transcription Factor Family AT1G74250 44.118 4.84e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2678 - - nnu:104585614 144.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2678 4 27926451 27939756 Sto4g2678 4 27926451 27939756 ECH