Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2673 ATGGGAAGGAAAAAGACAGAGGAGGCTGGCCCTGTAGCAAAGGCTAAGTCAAGTGGCAAAGATGCTCCTAAGAAGGAAAAGTTATCTGTCTCTGCCATGCTGGCCAGTATGGATGAAAAACCTGATAAACCCAAGAAAGTTTCTTCTTCCTCCAGTAAGCCCAAGGCGAAATCTGCTCCAAAGCCTTCTGCTTACACTGATGGTATTGATCTTCCTCCctctgatgaaCAAAATAATGTTTCTAAGCGGTCTATTCAGCAGCAGAGGCCTGACCTGAAGCCTCTTGAGGTATCTATTTCAGACAAAGAGTTAAAAAAACGTGAAAAGAAGGATGTTCTTGCTGCCCATGCTGCAGAGTTGGCTAAGCAGCAAGCACTTAAGGATGACCATGATGCTTTCACTGTGGTCATTGGAAGCCGTGCTTCAGTGCTTGATGGAGAGGATGATGCCGATGCTAATGTGAAAGATGTAACAATAGAAAATTTCTCTGTGTCAGCTCGGGGTAAAGAACTTCTGAAGAATGCATCAGTGAGGATATCTCATGGGAAGAGGTATGGTTTGGTTGGGCCCAATGGAAAGGGCAAGTCCACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCAGTACCAAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTTGGTGATGATAAAACGGCACTTGAAGCAGTTGTTTCAGCTAATGAAGAACTTGTTAAAACTCGACAGGAAGTTGCTTTTCTGCAGAATGCAACTTCTGTTGAGGAAAGTGTAAACAAAGATGATAGTTATGAAGATGATGCTGGAGAGAAGCTTGCTGAGCTATATGAAAAATTACAGCTGATGGGGTCTGATGCAGCTGAAGCTCAAGCATCAAAGATTCTAGCTGGTTTGGGTTTTACAAAGGATATGCAGGCCCGTGCGACAAAATCATTTAGTGGAGGTTGGAGGATGAGAATTTCCTTGGCCAGAGCACTTTTTGTGCAGCCAACTCTTTTATTGCTTGATGAACCTACAAATCATCTTGATCTAAGGGCTGTTCTATGGTTGGAGGAGTACTTGTGCCGATGGAAGAAGACTTTGGTGGTTGTCTCACATGATAGGGATTTCCTTAATACAGTTTGCAATGAGATTATTCATCTGCATGATTTGAAACTCCATTTCTATCGAGGAAATTTTGATGATTTTGAAAGTGGTTATGAACAGCGTCGTAAAGAAATGAATAAGAAGTATGAGATTTATGACAAGCAGATGAAAGCAGCCAAAAGGAGTGGGAACCGGGTTCAGCAGGAAAAGGTGAAGGATCGAGCAAAGTTTGCAGCTGCAAAGGAGGCATCAAAAAGCAAGGGCAAAGGCAAGGGTAAGGttgatgacgatgaagcccaAGCTGATGTTCCACAAAAGTGGAGGGATTACAGTGTTGAGTTCCACTTTCCTGAACCTACTGAGCTCACACCTCCACTTCTGCAGCTTATTGAAGTTAGCTTCAGCTACCCAAATAGGGAGGATTTTAGACTCTCAAATGTTGATGTTGGTATTGATATGGGGACTCGTGTAGCCATTGTTGGGCCTAATGGAGCTGGGAAATCTACACTGCTGAATCTTCTTGCTGGTGATTTGGTTCCAACTGAGGGTGAAGTTCGAAGAAGTCAGAAGTTGAGGATTGGAAGATATTCCCAGCACTTTGTGGACCTCCTAACAATGGATGAAACACCTGTTCAGTATCTTCTTCGTCTCCATCCAGACCAGGAGGGACTTAGCAAGCAAGAGGCTGTTCGTGCAAAACTCGGTAAGTTTGGACTTCCTAGCCATAACCATCTTACCCCTATTGCCAAATTATCAGGAGGGCAGAAAGCTCGGGTGGTTTTCACATCGATATCCATGTCAAATCCCCACATCTTGCTGTTGGATGAACCCACTAATCATCTGGATATGCAAAGTATTGATGCATTAGCTGATGCGCTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCGCGTGTTTGTGAGGATGAAGAGAGGAGTCAAATCTGGGTAGTTGAGGATGGTACTGTCAAAACGTTTGATGGAACGTTTGAGGATTACAAGGATGAGTTGCTGAGAGAAATTAAAGCTGAGGTTGATGATTGA 2157 0.4284 MGRKKTEEAGPVAKAKSSGKDAPKKEKLSVSAMLASMDEKPDKPKKVSSSSSKPKAKSAPKPSAYTDGIDLPPSDEQNNVSKRSIQQQRPDLKPLEVSISDKELKKREKKDVLAAHAAELAKQQALKDDHDAFTVVIGSRASVLDGEDDADANVKDVTIENFSVSARGKELLKNASVRISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKTRQEVAFLQNATSVEESVNKDDSYEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQARATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKYEIYDKQMKAAKRSGNRVQQEKVKDRAKFAAAKEASKSKGKGKGKVDDDEAQADVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSNPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVKTFDGTFEDYKDELLREIKAEVDD 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2673 718 CDD ABCF_EF-3 157 387 - -
Sto4g2673 718 MobiDBLite consensus disorder prediction 72 93 - -
Sto4g2673 718 MobiDBLite consensus disorder prediction 1 106 - -
Sto4g2673 718 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 5 718 - -
Sto4g2673 718 Pfam ABC transporter 508 643 IPR003439 GO:0005524
Sto4g2673 718 Pfam ABC transporter 172 342 IPR003439 GO:0005524
Sto4g2673 718 Gene3D - 154 439 IPR027417 -
Sto4g2673 718 PANTHER - 5 718 - -
Sto4g2673 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 416 IPR027417 -
Sto4g2673 718 Coils Coil 406 426 - -
Sto4g2673 718 MobiDBLite consensus disorder prediction 441 465 - -
Sto4g2673 718 ProSitePatterns ABC transporters family signature. 314 328 IPR017871 GO:0005524
Sto4g2673 718 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 491 716 IPR003439 GO:0005524
Sto4g2673 718 Gene3D - 455 717 IPR027417 -
Sto4g2673 718 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 157 410 IPR003439 GO:0005524
Sto4g2673 718 SMART AAA_5 517 693 IPR003593 -
Sto4g2673 718 SMART AAA_5 181 386 IPR003593 -
Sto4g2673 718 Coils Coil 233 253 - -
Sto4g2673 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 470 706 IPR027417 -
Sto4g2673 718 CDD ABCF_EF-3 491 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2673 Sto-Chr4 27878286 27880478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2673 490 669 Calmodulin-binding Proteins AT2G36910 31.068 7.04e-15 77.0