Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2666 ATGTCTACTTTTGTTTTCCCTGGTGGATTTCGATTCATCCCAAAAGATGAAGAATTGATTCAGTATTATCTTTTCAACAAAATAACAGGAATGCCACTACCCGAGGGTGTGGTTTTGGAGTGTGATCTCTACGGTAGTGAGAACCCATGGGAGATCTGGCAACGCTATAGCCACAAGGTGGTTAAGTGGGAAGAGGGAGAAGATCTTTACTTCTTCACAACCCTAAAGAAGAAGAGTTCACGTCGGATTGAGAGGAGTGTTGGTATAGGAAGATGGGAGGGAGAAGGCGGTTCAGATATCAAACATCCAAATACAGGAAAAGTTATTGGGTGTGTCAAGAGATTGCGTTTTGAGAAGAGTCAAACTCATCAAGATGGTGGATGGATCATGCATGAATACTCTTTGGATCCCTCTCACCTTCCTCCCCAATTTCAGCTTCATAATTATGTCCTTTGTCGGataaggaagaacaagagaatcATTAAAGATAAGAGGTCGACTAATACGAATTCAACTCAAATAAGTTCTAAGAGACTGAAGAAAGATAGTGCTTTGAAGAACATGGGGTCGTGTGATGTTTCATCACTCCCTTCCTTCCAATATGAAAATAGTGAATTTTCATCCCTTATTTCTATAGAGGAGGAGGACATTGATGGATATATTTCTTATatcgaaaattatttaaatgatcaaCCCCATGACAGTACTATTATATTAAATCCACAATTGGAAGACCATCAGAATGGAGATCAAAATATTTTGAAGAATGACCCAGTTACAACACCAGTTTCAATGGATGGTCAAGAAGGGGATGATGAATTTGCTTTATTGAATTTATGGGTACTTTTAGAAGTTCACATTGGAATTGCTTGTGTTAAGCCAATAGCTCCTGATTAA 897 0.3724 MSTFVFPGGFRFIPKDEELIQYYLFNKITGMPLPEGVVLECDLYGSENPWEIWQRYSHKVVKWEEGEDLYFFTTLKKKSSRRIERSVGIGRWEGEGGSDIKHPNTGKVIGCVKRLRFEKSQTHQDGGWIMHEYSLDPSHLPPQFQLHNYVLCRIRKNKRIIKDKRSTNTNSTQISSKRLKKDSALKNMGSCDVSSLPSFQYENSEFSSLISIEEEDIDGYISYIENYLNDQPHDSTIILNPQLEDHQNGDQNILKNDPVTTPVSMDGQEGDDEFALLNLWVLLEVHIGIACVKPIAPD 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2666 298 Pfam No apical meristem (NAM) protein 7 135 IPR003441 GO:0003677|GO:0006355
Sto4g2666 298 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Sto4g2666 298 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 7 229 - -
Sto4g2666 298 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Sto4g2666 298 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Sto4g2666 298 MobiDBLite consensus disorder prediction 162 181 - -
Sto4g2666 298 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2666 Sto-Chr4 27819525 27821637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2666 6 219 NAC Transcription Factor Family AT1G77450 29.596 1.08e-20 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g2666 NAM 5.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2666 - - ahf:112730219 150.984