Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2663 ATGGGGACACGGCCTCAGCAACCTTGtcgagaagaagaggaggaggagctACTAGGTCGTGGTACAACACTTTCTGGCCAATCCATTTCGACAAGCAGAAGTGTTGGGTCGCCATCCAGCCGGAGTGAGCAGACAATGGCTACACCAGCAAGTGATAACACATTTCTAAGATTAAACCATCTTGATATCCATGGAGATGATGCTGGATCCCAGGGAGCAGCTGCtagtaagaagaaaaagaggggCCAACGTGCTGTTGGAGGTGATAAGAGTGGAAGAGGGCTACGCCAATTTAGCATGAAAGTGTGTGAGAAGGTGGAAAGCAAGGGAAGAACCACTTACAATGAGGTGAAGCACCTTCAGTGTGTTGCAAGTGCTTGTCTCAGTAACATTTCTTCCTCTATTACTGTTCATGTTTTAGCTTGcagaaaagatgaaaaaaaatgTGCCTTAAGGCTGCCTCTTGTGTTTGACTCCCTTGCCTTGGATATTATTCAGATTCTTTCTTTGCTGCAAATTTTGAATTTCTCTGTGGAGCTAGTTATGCAATATTTAAAGTTCAGTGCTATTAGATTAGTAGCTGAGGTAGCTGACGAACTTGTAGCTGAATTTGCCGACCCAGGCAATAGTATTTCATCTCCTgatcagCAACAATATGATGAGAAAAACATTCGTAGGAGGGTTTATGATGCTTTGAATGTTCTTATGGCAATGGATATAATTTCTAAGGATAAAAAGGAAATACAATGGAAAGGTCTGCCTCGTACTAGTCTGAACGATATTGAAGAATTAAAGAAGGTGCGTCTTAGGCTCAGGaataatattgaaaagaaaGCAGCCTACCTACAAGAACTGGAGGAACAGTGTCGATTTGCTGACTTCTTGTCTTATTCCGTCAAGTACGTAGGTCTTCAGAACCTCATACAAAGAAATGAGCAATTATATAGCTCAGGAAATGCTCCCAGTGGAGGTGTTGCTTTACCTTTTATTTTAGTCCAGACTCGCCCCCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTGCATTTTGATTTCAATAGCACTCCTTTTGAGCTGCATGATGACAACTATGTTCTCAAGGCAATGAAATTTTGCGACGGACCACAAAATGATAATATGACGCACAATCTTACGGATGGAGGTGAAGGGTCTAGCATGTCAGGCTTGTATCAGGGGCAAGTTCTTCCTTCGGTTTCAACCCAACCAGTTAGAACTCCCACTTCACCACCTCTTCCTGGAATATTGAAGGCAAGAGTTAAGCATGAGCATTAA 1302 0.4009 MGTRPQQPCREEEEEELLGRGTTLSGQSISTSRSVGSPSSRSEQTMATPASDNTFLRLNHLDIHGDDAGSQGAAASKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVKHLQCVASACLSNISSSITVHVLACRKDEKKCALRLPLVFDSLALDIIQILSLLQILNFSVELVMQYLKFSAIRLVAEVADELVAEFADPGNSISSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKKVRLRLRNNIEKKAAYLQELEEQCRFADFLSYSVKYVGLQNLIQRNEQLYSSGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDGPQNDNMTHNLTDGGEGSSMSGLYQGQVLPSVSTQPVRTPTSPPLPGILKARVKHEH 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2663 433 PIRSF Txn_factor_DP 4 123 IPR015648 GO:0005667|GO:0051726
Sto4g2663 433 PIRSF Txn_factor_DP 191 433 IPR015648 GO:0005667|GO:0051726
Sto4g2663 433 PANTHER TRANSCRIPTION FACTOR DP 194 433 IPR015648 GO:0005667|GO:0051726
Sto4g2663 433 PANTHER TRANSCRIPTION FACTOR DP 22 118 IPR015648 GO:0005667|GO:0051726
Sto4g2663 433 MobiDBLite consensus disorder prediction 66 93 - -
Sto4g2663 433 Pfam Transcription factor DP 260 386 IPR014889 -
Sto4g2663 433 MobiDBLite consensus disorder prediction 21 53 - -
Sto4g2663 433 PANTHER TRANSCRIPTION FACTOR DP 194 433 - -
Sto4g2663 433 PANTHER TRANSCRIPTION FACTOR DP 22 118 - -
Sto4g2663 433 MobiDBLite consensus disorder prediction 408 433 - -
Sto4g2663 433 Coils Coil 268 288 - -
Sto4g2663 433 SMART E2F_TDP_2 90 252 IPR003316 GO:0005667|GO:0006355
Sto4g2663 433 Gene3D - 171 257 IPR036388 -
Sto4g2663 433 Gene3D - 85 148 IPR036388 -
Sto4g2663 433 MobiDBLite consensus disorder prediction 1 53 - -
Sto4g2663 433 CDD DP_DD 257 372 IPR014889 -
Sto4g2663 433 SUPERFAMILY E2F-DP heterodimerization region 258 385 IPR037241 -
Sto4g2663 433 Pfam E2F/DP family winged-helix DNA-binding domain 193 252 IPR003316 GO:0005667|GO:0006355
Sto4g2663 433 Gene3D Transcription factor DP 258 391 IPR038168 -
Sto4g2663 433 SUPERFAMILY "Winged helix" DNA-binding domain 181 253 IPR036390 -
Sto4g2663 433 SMART DP_2 259 431 IPR014889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2663 Sto-Chr4 27798245 27803989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2663 176 380 E2F-DP Transcription Factor Family AT5G02470 50.000 5.05e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Sto4g2663 DP 8.8e-36 No_clan