Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2658 ATGAGGCTACAGACATATGCGGGGCTTAGTTTGATTGCAACTCTAGCTGTTACATATCATGCATTCAATAGCAGAGGCCAGTTTTATCCAGCTATGGTTTTTCTGTCAACGTCCAAGATCAGTTTGGTACTTCTTCTCAACATGGGTCTGGTCATTATGTGTCTTTTATGGCAATTAACGAAAAAGGTATTTCTTGGCTCACTCCGAGAGGCAGAGGTTGAGAGGCTTAATGAGCAATCATGGAGGGAGGTTATGGAAATTCTCTTTGCAATTACCATTTTTAGACAGGATTTCTCTGTTACATTCCTTGCTATGGTCACAGCGCTGCTGTTGATTAAGGCTCTGCATTGGTTGGCTCAGAAAAGAGTTGAATATATTGAGACCACTCCTTCGGTGCCATTGTTGTCTCACATTCGAATTGTATCTTTTATGGGTTTCCTCCTCCTTCTAGATGGTCTCTTTTTATATAGTTCTATGAAGCATTTGATACAATCGTGGCAGGCTTCAgtttccctcttcttttcttttgaGTACATGATACTGGCAACAACAACagtgtcaatttttgtaaaatatctTTTCTATGTAAGTGACATGCTTATGGAGGGACAATGGGAAAGGAAACCAGTCTTCACATTTTACCTGGAACTTATTAGGGATTTGCTTCACTTGTCGATGTATATGTGCTTCTTCCTTGTAATCTTCATAAACTATGGTGTTCCTTTGCACTTAATACGAGAGCTATATGAGACATTTAGGAACTTCAAAGTTCGTGTTGCCGATTACATACGTTATCGTAAGATCACTTCAAACATGAATGATCGGTTTCCGGATGCAACCCCTGAAGAGCTTAATGCAAGTGACGCAACCTGTATTATCTGTCGTGAGGAGATGACTACAGCCAAAAAACTTATATGTGGACATCTTTTTCATGTGCATTGCCTCCGGTCATGGTTGGAGCGGCAGCATACTTGCCCTACCTGCAGAGCCTTGGTTGTACCACCAGAAAATGGGACAAATGCTGCTGGAGGGCAGCATGGATCACAATCAGATGCTCATCGACAAGGAACAGGGACAGGCACTGGAAGCACGGGTCAAGCTGAAGTTGGTGGTGGGGTGGGAACCGATAATTTGAGTCGGCATCAAGCAAGACTCCGAGCAGCAGCTGCAGCTGCTTCAATATATGAGAAGTCTTATGTATACCCGTCAGCAACTTCTTTAGTATGTTCCCCTGGATACACTGTTTATCCTCCAGTTCAAAGACCTGCATCTGAATCTACTAGTACTGAGTTTAACGGAGAACATGCTTCTAGTGAACAAACACAGAGACAGTTTCTCATCCCTGGTGGGCCAATGAATGTTCCCTTTCCTCCAATGGGACAGTTTCTTTTTCCTGCATCCCTAGCACATGCAGCCAATATGAACAATGGAGAGGGATCTGGATACGATCCGAATATGCCAAGCTCTCAGCTGGAAGCTCAAAAAAAACTTCTTCAGTACCAGATTGAGattttgcaaaatcagCTCCAGCTTCTGCAGAAGACAAGGGTAGATGGAAGTGCAAAGGAGGGCAAATCATCATTAAGTAGCAAAGGCAAGGACATTGCTTCGTCTTCTTCATCTGTGTCCGAGCATGGTGGTCATGAGGAGTTTCAAGATGGCAGTGCATAG 1671 0.4219 MRLQTYAGLSLIATLAVTYHAFNSRGQFYPAMVFLSTSKISLVLLLNMGLVIMCLLWQLTKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPSVPLLSHIRIVSFMGFLLLLDGLFLYSSMKHLIQSWQASVSLFFSFEYMILATTTVSIFVKYLFYVSDMLMEGQWERKPVFTFYLELIRDLLHLSMYMCFFLVIFINYGVPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTNAAGGQHGSQSDAHRQGTGTGTGSTGQAEVGGGVGTDNLSRHQARLRAAAAAASIYEKSYVYPSATSLVCSPGYTVYPPVQRPASESTSTEFNGEHASSEQTQRQFLIPGGPMNVPFPPMGQFLFPASLAHAANMNNGEGSGYDPNMPSSQLEAQKKLLQYQIEILQNQLQLLQKTRVDGSAKEGKSSLSSKGKDIASSSSSVSEHGGHEEFQDGSA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2658 556 MobiDBLite consensus disorder prediction 515 556 - -
Sto4g2658 556 SUPERFAMILY RING/U-box 271 335 - -
Sto4g2658 556 Coils Coil 488 515 - -
Sto4g2658 556 Pfam Ring finger domain 290 329 IPR001841 -
Sto4g2658 556 CDD RING-H2_synoviolin 288 329 - -
Sto4g2658 556 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 263 336 IPR013083 -
Sto4g2658 556 SMART ring_2 291 328 IPR001841 -
Sto4g2658 556 MobiDBLite consensus disorder prediction 339 377 - -
Sto4g2658 556 PANTHER - 1 487 - -
Sto4g2658 556 PANTHER RING ZINC FINGER PROTEIN 1 487 - -
Sto4g2658 556 ProSiteProfiles Zinc finger RING-type profile. 291 329 IPR001841 -
Sto4g2658 556 MobiDBLite consensus disorder prediction 341 370 - -
Sto4g2658 556 MobiDBLite consensus disorder prediction 420 439 - -
Sto4g2658 556 MobiDBLite consensus disorder prediction 522 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2658 Sto-Chr4 27726618 27730992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2658 1 539 C3H Transcription Factor Family AT3G16090 65.746 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2658 K10601 - gmx:100816441 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2658 4 27726618 27730992 Sto4g2658 4 27726618 27730992 ECH