Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2635 ATGGGTGCTTTTGCCGAATTCTGTATTGTTCCATTTCTGATGTTTCTGTGCTTTCTCTTTGGTGATACTGCTAGTCCCAACATCAACACATTACAAGTATGTGTAGATCAAAAGGGAATGGGATCCTGTTTCAGTACAGTACAAGCAGCAGTCAATGCAGTCCCTGATTATAGTGACCAAAGAACAATTATTTCGATTCATAGTGGCACTTATCATGAGAAAGTAATGGTGGGAAAAAGCAAAGCAAATATAACATTTAAAGGTGAAGGGTACGGTTCAACTATTATTACTTGGAATGACACCGCAAAGTCTGCAAATGGCACATTTCAAAGTGCCTCCGTCCAAGTCTTTGCCTCCAACTTCATTGCTCACAACATAAGCTTCAAGaacgAAGCACCAATTCCAAGACCAGGGGAAGAAGGAGCACAAGCAGTAGCAATAAGAGTAAGTGGAGATAAAGCCCAATTTTATGGCTGTGGGTTCTTTGGAGCCCAGGACACCCTCCACGATGATGAGGGTCGTCATTACTTTAAAGAATGCTTCATCCAAGGTTCCATTGACTTCATATTTGGCAATGGAAGGTCATTTTATGAGGATTGTCAAATAGATTCCATTGCGGATTCAACACAAAAATTCATAAATGGTGCTGTGACAGCACAAGGAAGATCCTTAGACACTGATAACACAGGCTTTGCTTTTGTGAATTGTAACATTGGAGGGAAAGGAAGAATATGGTTAGGTCGAGCATGGGGCCCTTATTCGCGTGTCATTTTTGCTTTCACAACTATGTCTGATGTTATTGTCCCTGAAGGTTGGAATGACTTCAATGTTCCTTCAAGAGACCAGACTGTATTCTATGGGGAATATCAATGCACGGGGCCAGGAGCTAATATGAGTACGAGGCCATCTTATGTGAGGAGACTAAATGACAAAGAAGCTTCTCCTTTCCTCAATACATCTTATATTGATGGAGACCAATGTGCACTCAGGGACCGCAGATTTCCACCCATACAGGCAAAAGAGTTGCCTTATTTGGAGTGTACAGTCTCTCTTCTTACTGATTATGAAGCTGCTAATCATTACCTTGACTGTGCACTCAGGGACCGCAGATTTCCACCCATACAGGCAAAAGAGTTGCCTTATTTGGAGTGTACAGTCTCTCTTCTTACTGATTATGAAGCTGCTAATCATTACCTTGACTGGGAGGTAGGAAAGCATGGTATAATTATTGAGTTCAATGATCCTGATTACAACACAAGACGTATACCTGCCTGA 1275 0.4157 MGAFAEFCIVPFLMFLCFLFGDTASPNINTLQVCVDQKGMGSCFSTVQAAVNAVPDYSDQRTIISIHSGTYHEKVMVGKSKANITFKGEGYGSTIITWNDTAKSANGTFQSASVQVFASNFIAHNISFKNEAPIPRPGEEGAQAVAIRVSGDKAQFYGCGFFGAQDTLHDDEGRHYFKECFIQGSIDFIFGNGRSFYEDCQIDSIADSTQKFINGAVTAQGRSLDTDNTGFAFVNCNIGGKGRIWLGRAWGPYSRVIFAFTTMSDVIVPEGWNDFNVPSRDQTVFYGEYQCTGPGANMSTRPSYVRRLNDKEASPFLNTSYIDGDQCALRDRRFPPIQAKELPYLECTVSLLTDYEAANHYLDCALRDRRFPPIQAKELPYLECTVSLLTDYEAANHYLDWEVGKHGIIIEFNDPDYNTRRIPA 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2635 424 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 326 - -
Sto4g2635 424 SUPERFAMILY AMMECR1-like 327 359 IPR036071 -
Sto4g2635 424 Pfam Pectinesterase 33 325 IPR000070 GO:0030599|GO:0042545
Sto4g2635 424 Gene3D - 29 329 IPR012334 -
Sto4g2635 424 SUPERFAMILY AMMECR1-like 364 414 IPR036071 -
Sto4g2635 424 ProSitePatterns Pectinesterase signature 2. 182 191 IPR033131 -
Sto4g2635 424 SUPERFAMILY Pectin lyase-like 32 326 IPR011050 -
Sto4g2635 424 ProSiteProfiles AMMECR1 domain profile. 271 424 IPR002733 -
Sto4g2635 424 Gene3D Hypothetical protein ph0010; domain 1 330 360 IPR027485 -
Sto4g2635 424 Pfam AMMECR1 359 413 IPR002733 -
Sto4g2635 424 Pfam AMMECR1 327 358 IPR002733 -
Sto4g2635 424 Gene3D Hypothetical protein ph0010; domain 1 361 415 IPR027485 -
Sto4g2635 424 PANTHER PECTINESTERASE 8-RELATED 29 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2635 Sto-Chr4 27489748 27500418 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2635 30 326 Carbohydrate Esterase AT1G05310 62.667 2.45e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2635 - - ahf:112696095 444.891