Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2633 ATGGGTGCTTTTGCCGAATTCTGTATTGTTCCATTTCTGCTGTTTCTGTGCTTTCTCTTTGGTGATACTGCTAGTCCCAATATCAACACATTACAGGTATGTGTAGATCAAAAGGAAAAGGGATCCTGTTTCAGTACAGTACAGACGGCAGTCAATGCAGTCCCTAATTATAGTGACCAAAGAACAATTATTTCGATTCATAGTGGCATTTATCATGAGAAAGTGATGGTGGAAAAAAGCAAAGCAAATATAACATTTCATGGAGAAGGATACACTAAAACTATTATTGTTTGGAATGACACTGCTAAGTCAGCAAATGGCACATATTTTAGTGGTTCTGTTCAAGTTTTTGCCCCCAACTTCATTGCTCACAACATAAGCTTTAAGgCACCAATTCCAAGTCCAGGGGAGGAAGGAGCACAAGCAGTAGCAATAAGAGTAGGCGGAGACAAAGCTCAATTTTATGGCTGCGGATTTTATGGTGCACAAGATACTTTGCACGATGACGATGGTCGTCATTATTTTAAAGACTGTTATATTGAAGGTTCCATTGACTTCATTTTTGGCAACGCAAGGTCTCTTTTCGAGAACTGCCAAATAGTTTCGATTGCGAAGCGAGAAAGTCCAGGACAGAGTTTCATAAATGGTGCAGTGACTGCTCAAGGAAGATCTTATGAGGAGAACACAGGCTTTGTTTTCGTGAATTGTAGCATTGAAGGGAATGGAAGAATATTGTTAGGTCGAGCATGGGGTAATTATTCTCGTGTGATTTTTGCTTTTACAAATATGTCAAACATTATTGCTCCTCAAGGTTGGAATGACTTCAATGATCCTTCAAGAGACCGGACTGTATTTTATGGAGAATACAAGTGCACAGGGGCAGGAGCTGATATGAGTATGAGGCCATCTTATGTGCAGAGACTAAGTGACGCACAAGTTTCTCCTTTTCTTACTACATCTTATATTGATGAAAGGCCATTATCATCAATGGCCGAAGAAGAATCCTCGTCTCTGGCTCCATTCACTATCCCAGAAAGCACCCCTGAataa 1050 0.4019 MGAFAEFCIVPFLLFLCFLFGDTASPNINTLQVCVDQKEKGSCFSTVQTAVNAVPNYSDQRTIISIHSGIYHEKVMVEKSKANITFHGEGYTKTIIVWNDTAKSANGTYFSGSVQVFAPNFIAHNISFKAPIPSPGEEGAQAVAIRVGGDKAQFYGCGFYGAQDTLHDDDGRHYFKDCYIEGSIDFIFGNARSLFENCQIVSIAKRESPGQSFINGAVTAQGRSYEENTGFVFVNCSIEGNGRILLGRAWGNYSRVIFAFTNMSNIIAPQGWNDFNDPSRDRTVFYGEYKCTGAGADMSMRPSYVQRLSDAQVSPFLTTSYIDERPLSSMAEEESSSLAPFTIPESTPE 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2633 349 SUPERFAMILY Pectin lyase-like 33 326 IPR011050 -
Sto4g2633 349 Gene3D - 29 334 IPR012334 -
Sto4g2633 349 PANTHER PECTINESTERASE 8-RELATED 29 323 - -
Sto4g2633 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 323 - -
Sto4g2633 349 Pfam Pectinesterase 34 323 IPR000070 GO:0030599|GO:0042545
Sto4g2633 349 MobiDBLite consensus disorder prediction 329 349 - -
Sto4g2633 349 ProSitePatterns Pectinesterase signature 2. 180 189 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2633 Sto-Chr4 27464379 27469951 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2633 30 323 Carbohydrate Esterase AT1G05310 61.074 1.20e-133 385