Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2602 aTGGCTTCCACACAGGTCCTATGGCTATTACCCAACGCCCTCTTACACAATCACCAACCAACATCAAGATCCCTGGGAAGAGCCCTAAGCCCTACTACGACTATTGGCCCGAACCCTAGTCTTCGTGTTCGGGCCTCACAGACGTCGGAGGACCCTAGCAAGCGCCAGAGAGCACCTCCTGGAGTCGACACCAGAATCCATTGGAACAACGAAGACGAAGGTTGGATTGGAGGCGCCAATAGTAGCACTAAACAGCAACAACCGCAGAATAATGACCCCAAGAATCTGCTCGGCGACAAATTTGCTGATTTGCTTAACGATTTTTCTGGTTCTCATTATGAATTTTTAGGAGTATCAACAGAAGCCGATTTAGAAGAGATTAAAGCAGCTTACAGGAGATTATCAAAGGAATACCATCCAGACACAACTTCACTCCCTCTGAAAACTGCCTCAGAGAAATTCATGAAGTTGAGAGAAGTTTACAATGTTCTGAGCAACGATGAGCGTCGAAAATTTTACGATTGGACACTCGTTCAAGAGGCTGCGAGCCGGCAATCGGAGAAGATGAAGGTGAAATTGGAGGATCCTTATGTGCAAGATCTGAAGAACTGGGAATCTGTTCCAGACATGGTTGATCGGCTTGGAGGCAGGAATATGAAGCTTAGTGATCAAGCAACCACGGCTCTCACTGTTGatattttcatcattatttttgCCATTTGCTGCATCATTTATAAACTATTTGATTTCGAAGCCTTGTAA 762 0.4475 MASTQVLWLLPNALLHNHQPTSRSLGRALSPTTTIGPNPSLRVRASQTSEDPSKRQRAPPGVDTRIHWNNEDEGWIGGANSSTKQQQPQNNDPKNLLGDKFADLLNDFSGSHYEFLGVSTEADLEEIKAAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSNDERRKFYDWTLVQEAASRQSEKMKVKLEDPYVQDLKNWESVPDMVDRLGGRNMKLSDQATTALTVDIFIIIFAICCIIYKLFDFEAL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2602 253 ProSiteProfiles dnaJ domain profile. 111 177 IPR001623 -
Sto4g2602 253 PRINTS DnaJ domain signature 113 131 IPR001623 -
Sto4g2602 253 PRINTS DnaJ domain signature 131 146 IPR001623 -
Sto4g2602 253 PRINTS DnaJ domain signature 149 169 IPR001623 -
Sto4g2602 253 MobiDBLite consensus disorder prediction 21 97 - -
Sto4g2602 253 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 36 248 IPR044618 -
Sto4g2602 253 SMART dnaj_3 110 169 IPR001623 -
Sto4g2602 253 Gene3D DnaJ domain 105 195 IPR036869 -
Sto4g2602 253 Pfam DnaJ domain 112 174 IPR001623 -
Sto4g2602 253 CDD DnaJ 112 166 IPR001623 -
Sto4g2602 253 MobiDBLite consensus disorder prediction 75 94 - -
Sto4g2602 253 MobiDBLite consensus disorder prediction 48 70 - -
Sto4g2602 253 MobiDBLite consensus disorder prediction 21 47 - -
Sto4g2602 253 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Sto4g2602 253 SUPERFAMILY Chaperone J-domain 111 179 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2602 Sto-Chr4 27228071 27230810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2602 112 174 C2H2 Transcription Factor Family AT1G74250 40.299 2.72e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2602 K23051 - jcu:105636994 317.005