Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2596 ATGTTCAACTACTTCAGATGGTTTCCCAATGGCAAAATAGTCTTTACTGCTCCTTCTCGACCACTGGTCATGCAACAGATAGAAGCATGCCATAATATTGTAGGAATACCTCAAGACTGGACAATTGATATGACAGGTCAACTAAGTCCTGCCAAAAGAGCATGCTTTTGGAAAACCAAACGAGTTTTCTTTGTCACCCCACAAGTCTTGGAAAAAGATATTCATTCTGGTAAATGTTTGGTGAAATACCTGGTATGTTTGGTGATTGATGAAGCTCACAGAGCAATGGGAAATTACTCTTATTGTGAAGCAGTTCGTGAGTTAATGGCTGTCCCAGTGCAGCTGAGAATATTAGCTTTAACTGCAACACCAGGAGCAAAGCAGCAGACGGTTCAGCATGTCATTGATAATTTGCATATCTCGAAGCTTGAATATCGCAATGAAAATGACAATGATGTTGTCTCATATGTTCACAATAGGAAGATAGAGTTGATTCAGGTGGCAATGGGTCAAGATGCTGAAGAAATAAACAATACGCTTTTGGAAGTAATACGTCCAATTGTAGCTCGGCTCTCAACAATTGGAGTTCTTCCAAATAGAGATTACCGCACTTTGAGCCCTTGTGAATTACTTGAAATACGGGAAAAGTTTCGTCAAGCACCCCCATATGATCTTTCCCATGTTAACCATGGAGATGTTGAAGGGTATTTTGGAGTTCTTATTACTCTTTACTATATCCATAAGCTACTTTCAAGTCATGGAATAAGACCAGCATATGAGATGCTTGAAAGAAAATTGAAGCAAGGGTTTTTTGCAAAATTTATGAGTAAAAATGAAGTTGTTCAGAAAGCAAGGCTCTTGATGCAGCAGAGCTTGACTCATGGAGCACCAAGCCCGAAGTTGTCCAAAATGCTTGAGATACTGCAGAAACATTTCAAAGCTAATGATCCACAGAGCTCCAGAGTTATTATTTTCTCAAATTATAGAGAAAGTGTGAgGGACATAATGGACGCACTAGCAAGTATTGGGGAACCAGTTAGAGCTACCCAGTTTATTGGTCAAAGTTCAGGGAAAACAATGAAAGGTCAGTCACAAAAAGTCCAACAGGCTGTGCTGGAGAAATTTCGATCTGGTACCTACAATGTCATTGTTGCAACATCAATTGGTGAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTTGTGTCTTTTGATGCTAATGTGTCGCCACTAAGAATGATTCAGCGCATGGGACGAACTGGAAGAAAGCATGATGGACAATTACTAGTTTTAGCTTGTGAAGGGACAGAGCTGAAGGGCTACTTGCGGAAACAAGCAAAGAGCAAGGCTATTAGTAAACACATGCGGAGTGGGGGCATAAATAGCTTCACTTTTCATCCTAGTCCCAGGATGATTCCTCATGTCTTTAAACCAGAGGTTCAATTCGTTGAGCTGTCAATTGAGAAATTTATTCCCCgtgaaaagaaagtaaaagatGACTCTTTTCAGAAGCCTGCATCTATTGACAAACTCAAAGTTTCTGAAATTGATTTACTTGCGAAATATTTTCACACATCTGGTGAAAATACATGGAGACCATCTCTTATTGCCTTTCCTCACTTCCAGACACATCCTTCCAGAGCACATAAAGTGAATCATTCATGTAGAACAGTAATGCTTATTGATATGATGCAGCGTCTGCGAGGACAAGTATCATTACCTGGACATAATAAAACTTCCATGCTTCAGAAAAGTCCGTGTTTAGAAGATAGCAATCCAATTGACATAACAGAGCTTGATGAAGTTAGATCAGATAATGAATCGCGCTCTAGGCATACAATTGGAAGCAATGCAGTCTCTGTAAATTGTCTGAAGCTGGATTCCTGTCATTTGGGGATTCAAATTGAAGACTTTGTTGATCTAACTAAGGATGATTCTAGATGTTGTGACTTGGACGAGAATCAAGAGAATACATGTGAGGTTGATGAGACAATTCCTGAGACTCCAATTGCTAAGAGGGCTATGTCAAATGATGGGCATAGTTTTGATGAAACCCCTGACCTTGTTCGGATCAAAACATCTATGTTGCTAGAGGATGCATTCAATAAAGACATGAAAGACGAAGACTTTAGTCCCCGTTTAACCAATTTCATTAACAGTGGTGTTGTTCCAGAGTCTCCTGTTGATGAGAGGGGTGATTTGCTTCCAGGTAATGttaaatttgCAGGGGTCATTCGGAACTGTAATCCACCTGTTCATCTCCAGAAGGAACAGCAAATTAGTTCTTTAAGTTCAGGGGAAAATGAAAAGGTCATTATTGATACTGAAACTGGTGTAAACAACATCTCTGTCTCTCCTGCTGGTAATGGAACTCAAACCCCTTTATTCGAGCGGAAGAGTTGTGTAATTAGAAGAGGCCGTGTCCTTATTTCTCCTACAGTTGAGGAATGCCAAACTCCTGTTGCAGATTCTATAAACCATAGCTTCAGCGAAGAATCATTTTTTGGTTGTGGAGAAATGTCTGGAAGTGTAAAACCAGTGCACAGATTTAAAAGGTTGCGTAAAGCTGATGCTAGTGGAagtaataggaatgagaatagcAGGAAAGATTATATTAGTCCAACAGAAAATCTTGCCAAATCAtccaaatttaattttgcacGAAACAAATGTGGTCGAGGTATAAGGAAATCAATGCAAAAGGTCAGAGTCTTCATTGACGAGGAAGCCGAGGTTTCTTCAGAAGCTGAGGTATctaatgatgaagatgatgaggtTGACAGTTCAATGGATAGTTTCATAGATGACAGGATGAACTCTACATCCAGCAGTCAGCCTGGAGCTAGTAGAATAGACATGATGGCAATTTACAGGCGTTCTTTGCTCAGTCAAACACCATTTGAGGGAGGGATTAATGTTTCTGCTACAATTAGTCCAGACCATGTGTCATCCATGACCAAAATTAGTGAAAATGCAGATTCTTCAGTCGAAAGAGTGAGTCATCTTCAGACACCTCAAATCGAGTCAATGAATCAGTCTGCTTGCAAGAGTTCACAATCAGTTGGTATCAACCAAATTACCTCAGAAGCTGTTCCTTCAAATTCTTCACTAGCTGAAATAACAACAACGATGAGAAGTCGAAAAAGGAAATTGACATTTCATCGTCCCGGATACCTTCCTAATATTAACCTGGAGAAGGAATTTGCACTTGAATCAAACAAAGAATCTATGGATGCCAATGCCAATACCAATGCAGTTAAGGATATTCTCTGTGATGATCACATTTTTGATAATCTTGATCTTGATGAGTTGGAGGCACAAGCAACTTCGCTTCTTAAACAAAAAGCAGATTTGTCAACTCAGAAGCAAGGTACAATACCTCAGTCACAGAACCCTCACATTTTCAACCCATCATTTGATCTTGggatataa 3432 0.3878 MFNYFRWFPNGKIVFTAPSRPLVMQQIEACHNIVGIPQDWTIDMTGQLSPAKRACFWKTKRVFFVTPQVLEKDIHSGKCLVKYLVCLVIDEAHRAMGNYSYCEAVRELMAVPVQLRILALTATPGAKQQTVQHVIDNLHISKLEYRNENDNDVVSYVHNRKIELIQVAMGQDAEEINNTLLEVIRPIVARLSTIGVLPNRDYRTLSPCELLEIREKFRQAPPYDLSHVNHGDVEGYFGVLITLYYIHKLLSSHGIRPAYEMLERKLKQGFFAKFMSKNEVVQKARLLMQQSLTHGAPSPKLSKMLEILQKHFKANDPQSSRVIIFSNYRESVRDIMDALASIGEPVRATQFIGQSSGKTMKGQSQKVQQAVLEKFRSGTYNVIVATSIGEEGLDIMEVDLVVSFDANVSPLRMIQRMGRTGRKHDGQLLVLACEGTELKGYLRKQAKSKAISKHMRSGGINSFTFHPSPRMIPHVFKPEVQFVELSIEKFIPREKKVKDDSFQKPASIDKLKVSEIDLLAKYFHTSGENTWRPSLIAFPHFQTHPSRAHKVNHSCRTVMLIDMMQRLRGQVSLPGHNKTSMLQKSPCLEDSNPIDITELDEVRSDNESRSRHTIGSNAVSVNCLKLDSCHLGIQIEDFVDLTKDDSRCCDLDENQENTCEVDETIPETPIAKRAMSNDGHSFDETPDLVRIKTSMLLEDAFNKDMKDEDFSPRLTNFINSGVVPESPVDERGDLLPGNVKFAGVIRNCNPPVHLQKEQQISSLSSGENEKVIIDTETGVNNISVSPAGNGTQTPLFERKSCVIRRGRVLISPTVEECQTPVADSINHSFSEESFFGCGEMSGSVKPVHRFKRLRKADASGSNRNENSRKDYISPTENLAKSSKFNFARNKCGRGIRKSMQKVRVFIDEEAEVSSEAEVSNDEDDEVDSSMDSFIDDRMNSTSSSQPGASRIDMMAIYRRSLLSQTPFEGGINVSATISPDHVSSMTKISENADSSVERVSHLQTPQIESMNQSACKSSQSVGINQITSEAVPSNSSLAEITTTMRSRKRKLTFHRPGYLPNINLEKEFALESNKESMDANANTNAVKDILCDDHIFDNLDLDELEAQATSLLKQKADLSTQKQGTIPQSQNPHIFNPSFDLGI 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2596 1143 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 643 1111 - -
Sto4g2596 1143 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 1 595 - -
Sto4g2596 1143 Gene3D - 293 458 IPR027417 -
Sto4g2596 1143 MobiDBLite consensus disorder prediction 910 947 - -
Sto4g2596 1143 CDD FANCM_ID 174 283 - -
Sto4g2596 1143 Gene3D - 1 157 IPR027417 -
Sto4g2596 1143 CDD SF2_C_FANCM_Hef 298 432 - -
Sto4g2596 1143 PANTHER FANCONI ANEMIA GROUP M PROTEIN 643 1111 IPR039686 GO:0006281|GO:0043138
Sto4g2596 1143 PANTHER FANCONI ANEMIA GROUP M PROTEIN 1 595 IPR039686 GO:0006281|GO:0043138
Sto4g2596 1143 MobiDBLite consensus disorder prediction 855 874 - -
Sto4g2596 1143 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 142 IPR014001 -
Sto4g2596 1143 MobiDBLite consensus disorder prediction 911 930 - -
Sto4g2596 1143 SMART helicmild6 333 424 IPR001650 -
Sto4g2596 1143 Coils Coil 1101 1121 - -
Sto4g2596 1143 Pfam Helicase conserved C-terminal domain 304 423 IPR001650 -
Sto4g2596 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 437 IPR027417 -
Sto4g2596 1143 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 300 468 IPR001650 -
Sto4g2596 1143 Gene3D hef helicase domain 171 292 - -
Sto4g2596 1143 MobiDBLite consensus disorder prediction 933 947 - -
Sto4g2596 1143 Pfam Type III restriction enzyme, res subunit 1 124 IPR006935 GO:0003677|GO:0005524|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2596 Sto-Chr4 27174002 27183763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2596 323 422 Eukaryotic Initiation Factors Gene Family AT3G13920 30.000 1.79e-07 53.1