Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2563 ATGGAAGGTCCTCCTTCCAACGATCTTTGTTCGGTGTGCCATGGATCCTTCACCACTCCTTGCCAAGCCAATTGTTCTCACTGGTTTTGCGGAAATTGTATTATGCTTGTGTGGCACCATGGTTCAGCAGTCCAGCCATGTAAATGCCCCCTATGTCGTCGTCAGATTACTTTGCTGGTTCCTACTGAGGATTCCTTAGGGCAGCGTCACGACCCTGAAGTTGCTCGTGTTCTAGGAAATATTGAAACATATAATCGTTTATTTGGTGGTCGTGAAACTGGTCTTGTTCAGAGGATGCAAGATCTTCCTTTTCTCTTGCGAAGGCTGCTACGAGAACTAATGGATCCTCACAGAACCCTTCCTCTTGTCATTAGGGCTCGTGTATATATTGCAATGATACTAAGTGCTGTCTACATTATCAGCCCTGTTGACATTATTCCGGAAGGGATATTaggaattgttggtttgttggATGATCTCCTAATTGTGCTCATCTGCTTCCTCCATGTTGCTGCACTTTATAGATCTGTACTCTATTTCCGTCATGGAGGTTCCTGA 558 0.4337 MEGPPSNDLCSVCHGSFTTPCQANCSHWFCGNCIMLVWHHGSAVQPCKCPLCRRQITLLVPTEDSLGQRHDPEVARVLGNIETYNRLFGGRETGLVQRMQDLPFLLRRLLRELMDPHRTLPLVIRARVYIAMILSAVYIISPVDIIPEGILGIVGLLDDLLIVLICFLHVAALYRSVLYFRHGGS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2563 185 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Sto4g2563 185 SMART ring_2 10 52 IPR001841 -
Sto4g2563 185 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Sto4g2563 185 PANTHER UNCHARACTERIZED 2 185 IPR038896 GO:0061630
Sto4g2563 185 Pfam Protein of unknown function (DUF1232) 130 164 IPR010652 -
Sto4g2563 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 101 IPR013083 -
Sto4g2563 185 SUPERFAMILY RING/U-box 6 61 - -
Sto4g2563 185 PANTHER BNAC07G13660D PROTEIN 2 185 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2563 35 185 C3H Transcription Factor Family AT1G72175 82.781 1.62e-77 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2563 K15707 - jre:109000985 308.916