Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2533 ATGAGTAGAAGAGGTGGAAGGCCAAAATCTGAGATATGGGAACATGTTACAAAATTGGATGGGAAACGAGTTCGATGCAATCATTGTGGATTTGAATTTGCTGAGAGTGCTCATAGGATTAAATCTCATCTTTCTCAAACTAAATACAATGGTATTAGATCTTGCACTCAATTTGCTCAACCTAAGACTACTCTTCATTCCAACCAAAGAGACAATAGTGAAAGCAGTTCAAAGAATGTTGAGGAGGATCTCATCACTTTACAAGGTGAGCAACAAAAGTGCAAGCAAGTTGGGCCTTTCTTTGTTTCTAACATGCTGGATCAACCTGACTTGAAATTAATTCAGTACGCCTTTAATATGTCACTTGATCAACGTGAGATAGTATTCTCTTCTGCGTATTCCTATTTGAATCGATTTGAGTTTACCACACTCAAGCCCAAAAGCTTATTGGATTCACAGGTGATAGATACTTTAGTTGAGAACTTAACTAATattgagagaaagaagaaaaataggccTTTGAATTGGTATCTTCCAGTCACATTTTCGATATTTATACCTATTCATGTTCAAAAGAATGCACAAGGCCATTTCTACTTATACATAGTTGATTTGAAGAAGCAAGAAGTTCAAATATTAGATTCTCTATCTCAATTTATAGATAAAAAAGATCGTGATAAGACAACACAAAAATTGTTGCTTGCATTGGATGAATTATTCATAGATGACATAACAGGCAAAAGTGGGACATTTACAAAATTCCACGTGACTATATCTGAGGGTGTTCTATCACAAAGCAATGAATATGATTGTGGGATATTTGTGGTGAACTTTATGCAACAGTCCGATAATTATGTGAATAAAATTCCTTCCTTTCAGTTTCATAGTGATGAAGAAAGATTGGATTTGGCTCTGAAACTGCTTAAAAGTGACCTAAATATGGAAAGAGAAAGACTATATGATGCAGCTAAACATCAGTATGAACATGGTAGAGACCAAGAAGATCATTTGGATTCATCTGGAATTAAAAGAAAGCGTGTTGATACTTGCAAGGCATTTTCTAAAGATGTTGAAATTAAAAGTGCAGATATTACAGAATTGTCTTATTCCCATATATCATTCAGAAACAATAATGTTGGTATGGAAAAAGGTCATACTAAAGGTTATCCAATACCAACAACAGATATTATAGGTCAAAAATTTGAAGGTTATAAAGATCAAATTTGGAAATGGGTAATGGAAGATGAGGTGTCAATAATAGGGGTATGGGGAATGGGAGGGGTGGGAAAAACAGCTTTAGTCACTCACATCCATAATATGCTTTTACAAGAACATGATGCTTCTGAGTATGATCATATCATTTGGGTCACTGTATCCCAAAATTATAGCATCTATGAGTTGCAAAGAATCATTGCTAGATCAATTGATTTGGACATATCAGAAGAGTATGAAGCCAAAAGAATTGCTGGAATATTGCTACATGCATTcaaaaagatgaagaaatgtgTTGTTGTTTTAGATGATGTTTGGGATTATATTTCATTGGAGGAGGTTGGATTTCCTGCTCTAAATCAAGCAGGCATTAAATTAATTCTGACAAGTCGttcatgggaggtgtgtcaaagTATGAATTGTAAACACAACATAATAACAATGGAGACTTTGAGTTATGGAGATGctttaaatttgtttaaaaagaCTCTTGGGGTCTTTGAAACTCTGCCCTCAGAGGTGAAAGATTTAGCAAAGGGTGTGATGCAACAATGTGAAGGATTGCCCCTTGCCATTATTACAATTGCAAGAAGCATGAAGGGAAAACAAGACTTGAGAGAATGGAAGCACATGTATGGAAGCCTATGTAATTTAGAGAATGGGCAATATGATATGGACAAATGGGTATTTCCAGTGCTAAGACGTAGTTATGATcacttaactaataaaaaactgCAAGAATATTTCTTGTATTGTGCAGTTTGTAACCATAGAAGTTTCATCTTTGAAAATTGGTTTGATGAGAGGAAGAGTTTGGAGGAAAAATACAATGAAGTTCACAGCCTAATAAAGAAGTTAAAGAACAACTCTCTGCTATTGGAAGGAACATATGGTTCAGAGTTTGAATTCCACAGTATGGTTAAGGGAATGGGTGTTAGTATTGTAAAAGAGAATCACAAAATCATGGAGAGTACTTACAGGTGTTTGACAAAAATACCACATGAGAGCGAATGGACAAAAGAGTTGGAGCAAGTTTTCTTGATGGGAAATGATATAGCAGAAATTTCAGATGGCATATCTCCAAGATGTTCCAAACTTTCAACTTTGCTTTTGGATTGGAATACAAGCCTCAAGTTTATCTGTGACGATTTTTTCATCAACATGCCTACTCTAAGAGTGCTGGATTTATCTCATACCAGCATTGAATGCCTCCCAAAATCTATTTCAAACTTGGAATCCCTTGTTGCCTTATTGCTTTCATATTGTGAATCATTGAAGAACGTGCCTTCATTAGCCAATCTCCAACGGTTAATATCATTGGATCTTTCTCACACAGCAATCTCTGAGGCACCTCATGGTTTGGAATTGCTAATCAATCTTAGAAGTCTGAATCTACTTGGAACAGTACAGCTGAAAATGTCAACGGCATCAATAATACCCAAATTGACCAAACTTCAATGCCTTTATCTAAATTGCATAGCAGAATCAATGGATGTGAGAGCACAAGATTTACAAGTTTTGAAAGAGTTAGAGAATGTTTCAGTCAACTTTTGTGACGTCCAAGAGTTCAATGCCTACATGAAAAGTCACCTCCATCATTGTGGACTAAAAagttactatttttatttaagtAAGGAAAAAACATCTCCTAGTAAATTTATAGGGGACCCAAGTAATGAGGGTATGAAAATGGTAAGGCTTGTGGGTATAGAATTGGAGTACTTGTGTTGTTTGTCTCCATTTTCTCATCTCAAAGATCTTAGTATTGAGAGATGCAATAGCATCAAAAAGTTGCTGACTCCGGAGTTATCAGCTCAACTCCAAAACTTGGAGAGGCTTAGTGTTGAAAAATGTGGGTCATTGAAGGAAATATTTTCAATAACAAGTGgagatgaggaagaagatgatgatgaagattatTGTTACATAAACCCTTTTGAAGATATTATCAGTGTCCCCAAATTGGAGTTTCTGAGGTTGGAAGACCTTCCAGAACTGAACTTCGTGTGCAAAGGGATACTGCTCTGTCATTCTCCCTTACGTTTGGATTTTGGACGTTGTCCAAAACTACTGTTGCCTCCTCAAATGGAGAAGATGATGCCGAATTGTATTCCCGtgataacttatttttaa 3345 0.3432 MSRRGGRPKSEIWEHVTKLDGKRVRCNHCGFEFAESAHRIKSHLSQTKYNGIRSCTQFAQPKTTLHSNQRDNSESSSKNVEEDLITLQGEQQKCKQVGPFFVSNMLDQPDLKLIQYAFNMSLDQREIVFSSAYSYLNRFEFTTLKPKSLLDSQVIDTLVENLTNIERKKKNRPLNWYLPVTFSIFIPIHVQKNAQGHFYLYIVDLKKQEVQILDSLSQFIDKKDRDKTTQKLLLALDELFIDDITGKSGTFTKFHVTISEGVLSQSNEYDCGIFVVNFMQQSDNYVNKIPSFQFHSDEERLDLALKLLKSDLNMERERLYDAAKHQYEHGRDQEDHLDSSGIKRKRVDTCKAFSKDVEIKSADITELSYSHISFRNNNVGMEKGHTKGYPIPTTDIIGQKFEGYKDQIWKWVMEDEVSIIGVWGMGGVGKTALVTHIHNMLLQEHDASEYDHIIWVTVSQNYSIYELQRIIARSIDLDISEEYEAKRIAGILLHAFKKMKKCVVVLDDVWDYISLEEVGFPALNQAGIKLILTSRSWEVCQSMNCKHNIITMETLSYGDALNLFKKTLGVFETLPSEVKDLAKGVMQQCEGLPLAIITIARSMKGKQDLREWKHMYGSLCNLENGQYDMDKWVFPVLRRSYDHLTNKKLQEYFLYCAVCNHRSFIFENWFDERKSLEEKYNEVHSLIKKLKNNSLLLEGTYGSEFEFHSMVKGMGVSIVKENHKIMESTYRCLTKIPHESEWTKELEQVFLMGNDIAEISDGISPRCSKLSTLLLDWNTSLKFICDDFFINMPTLRVLDLSHTSIECLPKSISNLESLVALLLSYCESLKNVPSLANLQRLISLDLSHTAISEAPHGLELLINLRSLNLLGTVQLKMSTASIIPKLTKLQCLYLNCIAESMDVRAQDLQVLKELENVSVNFCDVQEFNAYMKSHLHHCGLKSYYFYLSKEKTSPSKFIGDPSNEGMKMVRLVGIELEYLCCLSPFSHLKDLSIERCNSIKKLLTPELSAQLQNLERLSVEKCGSLKEIFSITSGDEEEDDDEDYCYINPFEDIISVPKLEFLRLEDLPELNFVCKGILLCHSPLRLDFGRCPKLLLPPQMEKMMPNCIPVITYF 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2533 1114 MobiDBLite consensus disorder prediction 60 81 - -
Sto4g2533 1114 PRINTS Disease resistance protein signature 419 434 - -
Sto4g2533 1114 PRINTS Disease resistance protein signature 496 510 - -
Sto4g2533 1114 PRINTS Disease resistance protein signature 589 603 - -
Sto4g2533 1114 PRINTS Disease resistance protein signature 790 806 - -
Sto4g2533 1114 SUPERFAMILY L domain-like 732 1098 - -
Sto4g2533 1114 Pfam NB-ARC domain 404 642 IPR002182 GO:0043531
Sto4g2533 1114 Pfam Leucine rich repeat 769 826 IPR001611 GO:0005515
Sto4g2533 1114 Gene3D - 555 645 IPR042197 -
Sto4g2533 1114 Coils Coil 673 693 - -
Sto4g2533 1114 ProSiteProfiles Zinc finger BED-type profile. 7 73 IPR003656 GO:0003677
Sto4g2533 1114 PANTHER - 321 1080 - -
Sto4g2533 1114 PANTHER DISEASE RESISTANCE PROTEIN RP 321 1080 IPR044974 GO:0006952
Sto4g2533 1114 Gene3D - 382 554 IPR027417 -
Sto4g2533 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 656 IPR027417 -
Sto4g2533 1114 Gene3D Adenoviral Proteinase; Chain A 102 312 - -
Sto4g2533 1114 ProSiteProfiles Ubiquitin-like protease family profile. 77 282 IPR003653 GO:0006508|GO:0008234
Sto4g2533 1114 Pfam Ulp1 protease family, C-terminal catalytic domain 176 280 IPR003653 GO:0006508|GO:0008234
Sto4g2533 1114 Gene3D Ribonuclease Inhibitor 718 1106 IPR032675 -
Sto4g2533 1114 SUPERFAMILY Cysteine proteinases 106 309 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2533 Sto-Chr4 26695380 26700849 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2533 416 607 WRKY Transcription Factor Family AT5G45050 25.616 2.87e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2533 K13459 - gmx:100799733 435.261