Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2520 ATGTCACTCAACATGAAAACCCTAACTCAAGCCTTGGCTAAAACCGCTGCGGTTATTGAGAAGACCGTCCAGACCACTGTGCAGGAGGTCACTGGACCCAAGCCACTCCAGGACTACGAGCTCCTTCACCAGATCGGCTCTGCTGGGCCTGGTCTCGCCTGGAGGTTGTACTCGGCCAGGGCGCGTGATCAGACGCGTCAGCACCAGTACCCAGTTGTTTGCGTTTGGGTATTGGATAAGCGAGTTCTGTCGGAAGCTCGAATGCGAGCTGGGTTGACCAAGTCGGCGGAGGATTCGTTTTTGGATTTGATTCGGGCGGATGCGAGTAAGCTAGTGCGGCTGAGGCATCCAGGGGTGGTGCATGTGGTGCAGGCGCTGGATGAGAGCAAGAATGCTATGGCAATGGTGACTGAACCCTTGTTTGCGTCTGTGGCTAATACTCTTGGAGATTTGGAGAATGTTGCTGTTGTTCCTAAGGAGCTCAAGGGAATGGAAATGGGACTGTTGGAGGTGAAACATGGTTTACTTCAGATAGCAGAATCCTTGGACTTTCTTCACAACCATGCACATCTTATTCATCGAGCTATATCACCTGAGAATATTCTGATTACTTCGAGTGGAGCTTGGAAGCTTGGTGGATTTGGTTTTGCAATTTCAGCTGCTCAGACCTCTGGTGACTCAGCTAATCTGCAAGCTTTCCATTATGCTGAATACGATGTTGAGGATTCAATTCTGCCAGTTCAGCCATCACTTAATTACACTGCTCCTGAGCTGGTGCGAAGTTCTGCATCTGCATCTTCAGTTGGAAGCTCTTCTGATATTTTCAGTTTTGGATGCCTAGCCTACCATTTAATCACTCGCAAGCCTTTGTTTGATTGCCACAACAATGTGAAGATGTACATGAATACTTTGAATTACTTATCCAGTGACACTTTCTCATCTATTCCACCGGAATTGGTTTCTGACTTACAAAGGATGCTATCTCCCAGCGAGTCTTTCAGGCCTACGGCAATGGATTTTACAGGCTCCCCATTTTTTCGGAATGACACTAGGTTGCGTGCTCTGCGCTTCCTTGATCACATGCTTGAAAGAGATAATATGCAGAAGTCAGAGTTCTTGAAAGCACTGTCAGATATGTGGAAGGATTTTGATTCCCGTGTGTTGCGGTACAAGGTCCTTCCACCACTTTGTGCGGAACTTAGAAATTTGGTAATGCAGCCAATCATTCTGCCAATGGTTCTTACAATTGCAGAATCTCAGGATAAAAGTGATTTTGAGCAATCAACACTTCCATCCCTTGTTCCTGTCCTAAGTGCTGCCACTGGCGAGACACTATTGCTACTTGTGAAACATGCAGATCTCATAATAAATAAGACTAGTCAGGAGCATTTAGTATCTCATGTTCTACCCTTGATTTCTCGGGCCTTTGATGATACTGATGCTCGCATACAAGAAGAGGTGCTGAAGAAATCTGTCTCCCTTGCCAAGCAACTAGATGCCCAGCTAATCAAGCAAGTGGTCTTGCCTCGTGTTCATGGCTTAGCACTTAAAACAACAATTGCTGCGGTTCGTGTCAATGCTTTGTTGTGCTTTGGGGACTTTGTTACCCGTCTTGATAAACCTGCAGTCATGGACATCTTGCAAACTATTCAGCGTTGTACTGCTGTTGACCATTCTCCTCCTACACTTATGTGTACCCTTGGGGTTGCAAACTCTATTTTTAAGCGGTATGGAGTAGAGTTTGTTGCTGAGCATGTTCTTCCGTTGCTTATGCCCCTCCTGACTGCTCAACAGCTAAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTGAGTAAaatagaagagaagagaggagtGGTCGTGACTGATTCTGAAATGCTAGAGGCGAAACCATCTTCGATTAATGGGTATCAAATCGAAGCATTGAGCAAAACAAGTGGCACTGTTCCTTCTTCAATAAAAAGTGGCTCCTCTTGGGATGAGGATTGGGTTACCTCAACAAAGGCAGCCTCCACTCGTGTCCAGAATAATACCAACACATCCATAACATCTGTATCTAATCAGCAGAAAACCATGCCATACCCCTCAGAGGATGCAGAGTGGCCTCCTCGAGCATCTTCTGCTGTTACCCCTCAATTTGGTGATACTGAAAAGCATACGAAGGCGCAAGGGACCTCATCTATGTCTAGTTTTGAAGATATTGATCCTTTTGCTGATTGGCCCCCACGCCCTAGTGGTACATTAGGTGGGTCTGGAATTTCCAAGAATGGAACTTTAGGACCACCAGTAAACAAATCAGAATATAATTCAATGTCAGGTAGTTCAAACAGTATGAATTTTAAAACCAATAGCAGTTGGACCGTTGGTTCCCAAACTTCTGCAGAATCAGTTGGATTCAATTTTGTGAATGCTAGTTCAACCACCAGTAGCCTGAATGGAGGTCTTAATTCTCTGAACACTCTTGGGTTTCTAGAACAGAATCAAGGATTTCCTGCTTTGAATGCTTCACGTCCCGAAAGCAAGTCAACAGATATTGGATCCATCTTTGCTTCCAACAAGAACGACCAGATAGCACCTAAACTTGCACCACCTCCTTCAACTGCAGTGGGAAGAGGAAGAGGGAGAGGAAGAGGGAGAGGGGTTGCTTCAACCGGTCGGTCGGCCAATACAAAGTCGAATTCTGAGCAGCCACCCCTTATGGATTTGTTGGGGTAG 2730 0.4535 MSLNMKTLTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYELLHQIGSAGPGLAWRLYSARARDQTRQHQYPVVCVWVLDKRVLSEARMRAGLTKSAEDSFLDLIRADASKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASVANTLGDLENVAVVPKELKGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENILITSSGAWKLGGFGFAISAAQTSGDSANLQAFHYAEYDVEDSILPVQPSLNYTAPELVRSSASASSVGSSSDIFSFGCLAYHLITRKPLFDCHNNVKMYMNTLNYLSSDTFSSIPPELVSDLQRMLSPSESFRPTAMDFTGSPFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNLVMQPIILPMVLTIAESQDKSDFEQSTLPSLVPVLSAATGETLLLLVKHADLIINKTSQEHLVSHVLPLISRAFDDTDARIQEEVLKKSVSLAKQLDAQLIKQVVLPRVHGLALKTTIAAVRVNALLCFGDFVTRLDKPAVMDILQTIQRCTAVDHSPPTLMCTLGVANSIFKRYGVEFVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKDMLSKIEEKRGVVVTDSEMLEAKPSSINGYQIEALSKTSGTVPSSIKSGSSWDEDWVTSTKAASTRVQNNTNTSITSVSNQQKTMPYPSEDAEWPPRASSAVTPQFGDTEKHTKAQGTSSMSSFEDIDPFADWPPRPSGTLGGSGISKNGTLGPPVNKSEYNSMSGSSNSMNFKTNSSWTVGSQTSAESVGFNFVNASSTTSSLNGGLNSLNTLGFLEQNQGFPALNASRPESKSTDIGSIFASNKNDQIAPKLAPPPSTAVGRGRGRGRGRGVASTGRSANTKSNSEQPPLMDLLG 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2520 909 Gene3D - 350 623 IPR011989 -
Sto4g2520 909 MobiDBLite consensus disorder prediction 675 767 - -
Sto4g2520 909 Gene3D Transferase(Phosphotransferase) domain 1 148 349 - -
Sto4g2520 909 MobiDBLite consensus disorder prediction 856 909 - -
Sto4g2520 909 MobiDBLite consensus disorder prediction 714 737 - -
Sto4g2520 909 CDD PK_SCY1_like 45 348 - -
Sto4g2520 909 SUPERFAMILY ARM repeat 347 609 IPR016024 -
Sto4g2520 909 MobiDBLite consensus disorder prediction 888 902 - -
Sto4g2520 909 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 7 908 - -
Sto4g2520 909 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 908 - -
Sto4g2520 909 Pfam Protein kinase domain 103 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2520 909 SUPERFAMILY Protein kinase-like (PK-like) 34 350 IPR011009 -
Sto4g2520 909 Gene3D Phosphorylase Kinase; domain 1 37 138 - -
Sto4g2520 909 MobiDBLite consensus disorder prediction 675 699 - -
Sto4g2520 909 ProSiteProfiles Protein kinase domain profile. 39 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2520 Sto-Chr4 26564981 26575822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2520 170 304 MAP Kinase Gene Family AT1G10210 29.710 2.56e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Sto4g2520 Pkinase 3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2520 K17541 - gmx:100796211 1328.92