Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto4g2515 | ATGGATGATTTGTTTGATCGTCTCCCTGATGAAGCCAAACTAGGGATCACCATCTTCTATGTGCTAGAAATACTCGCAAATATTTTAGGGATGGCATATTACATGTATCCAAACAAAGTCTTAGCAATTGCCGTTTTAACGACGGTAATCCTCGGGTTCTTGTTTggttttttaacaattttaattGTTAGAAGAGATAATCGACTCGGTGAAGTGAACGACATCGAGAATCAACTTCAGAGTTCTGATCAAACGACACGGAGTTCTAGGCTTTTTACTATGGCTCTGCCGCCGCTAAAGAGTTTTAGCAGTGACGATAATAATGAAACGACTTTGTCGTCTTCCGCACAGTGTGTCGTTTGCTTGGAAGAATTCAAGAACGGGGAGATGATTCAGCCTTTTCCAAGTTGCGGCCATGAGTTTCATGTGTCTTGCATTCGTTCTTGGTTGAACGGTGGAAATATTACGTGTCCGATATGTCGTTTTAGCTTACAAGATGTAATATTGTCTACACTAACTACTACTAGTATTACTACCTAG | 540 | 0.3963 | MDDLFDRLPDEAKLGITIFYVLEILANILGMAYYMYPNKVLAIAVLTTVILGFLFGFLTILIVRRDNRLGEVNDIENQLQSSDQTTRSSRLFTMALPPLKSFSSDDNNETTLSSSAQCVVCLEEFKNGEMIQPFPSCGHEFHVSCIRSWLNGGNITCPICRFSLQDVILSTLTTTSITT | 179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto4g2515 | 179 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 117 | 161 | - | - | |
Sto4g2515 | 179 | SUPERFAMILY | RING/U-box | 117 | 165 | - | - | |
Sto4g2515 | 179 | PANTHER | OS06G0666500 PROTEIN | 62 | 166 | - | - | |
Sto4g2515 | 179 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 62 | 166 | - | - | |
Sto4g2515 | 179 | Pfam | Ring finger domain | 117 | 161 | IPR001841 | - | |
Sto4g2515 | 179 | SMART | ring_2 | 118 | 160 | IPR001841 | - | |
Sto4g2515 | 179 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 94 | 168 | IPR013083 | - | |
Sto4g2515 | 179 | ProSiteProfiles | Zinc finger RING-type profile. | 118 | 161 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto4g2515 | Sto-Chr4 | 26514008 | 26514547 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto4g2515 | 40 | 164 | C3H Transcription Factor Family | AT1G04360 | 30.714 | 1.06e-12 | 63.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto4g2515 | - | K10664 | adu:107470824 | 90.1225 |