Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2509 ATGGATTTTTCACCTACCCACTCTCTTTCCAAAACCTCTCCttcattttatcccttttctCTTTCCCTCAAACCAAACGCTTTGAAATTACTGCGAGTTCAACCAAATTTCGCTTCCCAGTCCAGAATCTTCCTCCGGAAGCCATCGCTTTCCCGCCAAAAGAATCCTGTGATAAGAGCTACCTCGAGTTCAAATCCAGCACAAAATGACGGTTTTGTGCTGGAAGACGTTCCACACTTGACAGATTTCCTTCCCGATTTACAGTCTTATCCAAATCCATTGCAAAAGAGGCAAGCTTATGTAATGTTCAAGAAAAATTTTGTGACCCCAGAAGACGTGGTTGCACAAAATATTGTAATTCAAAAAGACAGTCCTAGAGGAGTTCATTTTCGGCGTGCTGGACCTCAAGAAAAGGTTTATTTCAAGTCAGATGAAGTTCGTGCTTGCATAGTGACATGTGGAGGATTATGCCCAGGAATCAATACAGTGATTAGGGAAATTGTTTGTGGCTTGAACTACATGTATGGTGTTGAGGATATACTTGGAATTGAGGAAGGATATAGAGGATTTTATTCAAAAAACACCTTGAAATTGTCTCCCAAAGTGGTTAATGATATCCATAAACGTGGTGGCACCTTTCTTCGCACGTCTCGAGGAGGACATGATACCCAGAAGATAGTTGATAACATTCAAGACAGGGAAATAAATCAGGTATACATTATTGGAGGTGATGGTACACAGAAAGGAGCTGCACGCATATATGAGGAAGTTAAAAAACGTGGTCTTCAAGTGGCTGTTGCTGGGATTCCAAAGACAATTGACAATGATATTGCTGTGATAGACAAATCTTTTGGATTTGATACTGCTGTGGAAGAAGCTCAAAGGGCCATTAATGCTGCACACGTGGAGGTTGAAAGTGTTGAAAATGGAGTTGGGATTGTTAAACTAATGGGCAGATACAGTGGTTTCATCGCAATGTATGCAACTTTGGCAAGTCGAGATGTGGATTGCTGCTTGATTCCGGAGTCCTCATTTTATTTAGAAGGAAAGGGTGGGCTCTTTGACTTTATTGAAGAGAGGCTAAAAGAAAATGGACATTTAGTTATTGTGTTGGCAGAAGGTGCTGGTCAAGAATATGTTGCTGCTGACGTGCATGCAGCAAATGAGAAGGATGCATCAGGAAACAGGCTACTTCTTGATGTTGGTCCTTGGTTATCCCAAAAGATCAAGGATCATTTCACACAGGATCGGAAAATGGCAGTAAACATGAAATATATAGATCCAACATACATGATTCGAGCTATTCCGAGTATTGCATCAGACAACATTTACTGCACTCTCCTTGCTCATAGCGCTGTTCATGGGGCTATGGCCGGGTACACCGGCTTCACGGTTGGCCCTGTAAACAGTAAACACGCATATATTCCAATTGCTCGTGTGACTGAGAAAACAAACACAGTGCAGCTGACAGACCGTATGTGGGCTAGGCTTCTTGCATCAACAAACCAACCAAGTTTTCTGACATCTAATGATTTGACTCAAGAAATTACAGTTGACAAAGAGACATTTCCATTAGACTTCTTCTTCCACTTCCTCAGGCCTCAGCCGCCATCATCATCGTCGAGAGCCACATCACCTGCTTCCTCTAGTAGTATAGACTTTTGGTGCAACCAAACCCCACACCCGGACCCATGCAAGCAATACTTCGTGAGCCGAACCCAACGGTTCAGACCGAAGGACGATTCGGAGTTCACGAGATTGCTGGTTCAACTAGCAATGGATCAGGCCCAGTTTATGCATAAACAGGCCCATGAATACGGCCCAAAATGCGTCACGAAAAACCAAAAATGCGTCTTCACGGATTGCCTAAAGCTCTACGACAACACCATCTTCCACCTGAACCAAaccctccaaaccctaaataataacaACGAATCGAGCTTCTCGCTTCTCCTCGACGCCCAAACATGGCTCAGCGCCGCCCTCACCAACATCGAGACCTGCCGGAGCGGCGCCGCGGAGCTGATCTCCGGCGGCGAAGTCTTCTCCGCCGCCGACGACGAAGCGAGCGACGGCGTGAGGAAGATGATAAGCAATGTGCTGGCGGTTAATCACGGGATGATACTGAGAACACAAGGTGAGATCGAGAGCGAGAATGCGAGATTGGAAGGAAATGGAGATGGATTTCCGATGTGGTTTCCGAGGCATGAGAGGAGGCTATTGAGGTCGAATTCTGGAATAGTGAAGGCGAATATTGTGGTGGCGAAGGATGGTTCGGGGCATTTTACGACGGTGCAGGCGGCAATCGATGCGGCGGCGAAGAGAAGAGTGAAGACGAGGTTTGTGATACGCGTGAAGAGAGGGATTTACGAAGAGAATATTGAGGTTGATAAGAATAATGTGAATCTTATGATTGTTGGTGATGGAATGAGGGTTACGATAATCACGAGTAGTAAGAGTACTCAAGATGGATTAACCACCTATAGCTCTGCAACTGCAGGCATAGATGGTCCTCGCTTCATTGCACGAGACATCACTTTCAGAAACACGGCTGGTCCTCAAAAGGGTCAAGCCGTGGCGCTCCGATCAGCCTCTGACCTCTCGGTCTTCTACCGCTGCGGCATCGAAGGTTACCAAGACACTCTGATGGCTCACGCCCAGCGCCAATTCTACCGGAACTGTAAAATCTCCGGCACGGTGGACTTCATCTTCGGCAACGCCGCAGTTGTGTTACAAAACTGCTTAATTCTCGCAAGAAAGCCCTTAGATGGCCAAGCCAACATGATTACGGCCCAAGGCCGAGGCGACCCATTCCAGAACTCCGGGATTTCAATAATCAATTCTCAGATTCGGGCCGACCCCGAGTTCAGGCCCGTAGCCCGTAAGTTCCAGACCTACTTGGGCCGGCCGTGGCAGCAATATGCGAGAGTGGTTGTCATGAAGACGTACATTGAAAGCCTGGTGAGCCCATTGGGCTGGTCTCCATGGGGCAATTCTAATTTTGCTCAAGATACGTTGTATTTTGGGGAATATGAGAATACTGGGCCTGGGTCATCTACAAAAGGGAGGGTAAGCTGGCCCGGGTTTCATGTCATTACAAGCCCAAAAGAGGCAGAACAGTTCACTGTGGGTAGCCTTCTTGCTGGTCGCACATGGTTACCTTCCACTGGGGTGCCTTTTACTTCTGgcatttaa 3195 0.4613 MDFSPTHSLSKTSPSFYPFSLSLKPNALKLLRVQPNFASQSRIFLRKPSLSRQKNPVIRATSSSNPAQNDGFVLEDVPHLTDFLPDLQSYPNPLQKRQAYVMFKKNFVTPEDVVAQNIVIQKDSPRGVHFRRAGPQEKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLNYMYGVEDILGIEEGYRGFYSKNTLKLSPKVVNDIHKRGGTFLRTSRGGHDTQKIVDNIQDREINQVYIIGGDGTQKGAARIYEEVKKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFIAMYATLASRDVDCCLIPESSFYLEGKGGLFDFIEERLKENGHLVIVLAEGAGQEYVAADVHAANEKDASGNRLLLDVGPWLSQKIKDHFTQDRKMAVNMKYIDPTYMIRAIPSIASDNIYCTLLAHSAVHGAMAGYTGFTVGPVNSKHAYIPIARVTEKTNTVQLTDRMWARLLASTNQPSFLTSNDLTQEITVDKETFPLDFFFHFLRPQPPSSSSRATSPASSSSIDFWCNQTPHPDPCKQYFVSRTQRFRPKDDSEFTRLLVQLAMDQAQFMHKQAHEYGPKCVTKNQKCVFTDCLKLYDNTIFHLNQTLQTLNNNNESSFSLLLDAQTWLSAALTNIETCRSGAAELISGGEVFSAADDEASDGVRKMISNVLAVNHGMILRTQGEIESENARLEGNGDGFPMWFPRHERRLLRSNSGIVKANIVVAKDGSGHFTTVQAAIDAAAKRRVKTRFVIRVKRGIYEENIEVDKNNVNLMIVGDGMRVTIITSSKSTQDGLTTYSSATAGIDGPRFIARDITFRNTAGPQKGQAVALRSASDLSVFYRCGIEGYQDTLMAHAQRQFYRNCKISGTVDFIFGNAAVVLQNCLILARKPLDGQANMITAQGRGDPFQNSGISIINSQIRADPEFRPVARKFQTYLGRPWQQYARVVVMKTYIESLVSPLGWSPWGNSNFAQDTLYFGEYENTGPGSSTKGRVSWPGFHVITSPKEAEQFTVGSLLAGRTWLPSTGVPFTSGI 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2509 1064 Gene3D - 143 332 - -
Sto4g2509 1064 Pfam Phosphofructokinase 149 454 IPR000023 GO:0003872|GO:0006096
Sto4g2509 1064 TIGRFAM PME_inhib: pectinesterase inhibitor domain 536 705 IPR006501 GO:0004857
Sto4g2509 1064 Gene3D Invertase/pectin methylesterase inhibitor family protein 547 707 IPR035513 -
Sto4g2509 1064 PANTHER - 37 518 - -
Sto4g2509 1064 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 550 705 IPR035513 -
Sto4g2509 1064 Coils Coil 290 310 - -
Sto4g2509 1064 ProSitePatterns Pectinesterase signature 2. 896 905 IPR033131 -
Sto4g2509 1064 Pfam Plant invertase/pectin methylesterase inhibitor 551 702 IPR006501 GO:0004857
Sto4g2509 1064 CDD PMEI-like_3 555 707 - -
Sto4g2509 1064 PRINTS ATP-dependent phosphofructokinase family signature 150 169 IPR022953 GO:0003872|GO:0006002|GO:0006096
Sto4g2509 1064 PRINTS ATP-dependent phosphofructokinase family signature 234 250 IPR022953 GO:0003872|GO:0006002|GO:0006096
Sto4g2509 1064 PRINTS ATP-dependent phosphofructokinase family signature 267 284 IPR022953 GO:0003872|GO:0006002|GO:0006096
Sto4g2509 1064 PRINTS ATP-dependent phosphofructokinase family signature 285 303 IPR022953 GO:0003872|GO:0006002|GO:0006096
Sto4g2509 1064 PRINTS ATP-dependent phosphofructokinase family signature 306 322 IPR022953 GO:0003872|GO:0006002|GO:0006096
Sto4g2509 1064 PRINTS ATP-dependent phosphofructokinase family signature 363 375 IPR022953 GO:0003872|GO:0006002|GO:0006096
Sto4g2509 1064 Pfam Pectinesterase 751 1049 IPR000070 GO:0030599|GO:0042545
Sto4g2509 1064 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 77 507 IPR012004 GO:0003872|GO:0005524|GO:0006096
Sto4g2509 1064 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 4, CHLOROPLASTIC 37 518 - -
Sto4g2509 1064 SMART PMEI_2 547 703 IPR006501 GO:0004857
Sto4g2509 1064 Gene3D - 745 1064 IPR012334 -
Sto4g2509 1064 SUPERFAMILY Pectin lyase-like 748 1063 IPR011050 -
Sto4g2509 1064 SUPERFAMILY Phosphofructokinase 81 518 IPR035966 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2509 Sto-Chr4 26439022 26451511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2509 536 1064 Carbohydrate Esterase AT3G47400 54.004 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2509 K00850 - qsu:112033863 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2509 4 26439022 26451511 Sto4g2509 4 26439022 26451511 ECH