Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2504 TTGATTCCGGAGTCCTCATTTTATTTAGAAGGAAAGGGTGGGCTCTTTGACTTTATTGAAGAGAGGCTAAAAGAAAATGGACATTTAGTTATTGTGTTGGCAGAAGGTGCTGGTCAAGAATATGTTGCTGCTGACGTGCATGCAGCAAATGAGAAGGATGCATCAGGAAACAGGCTACTTCTTGATGTTGGTCCTTGGTTATCCCAAAAGATCAAGGATCATTTCACACAGGATCGGAAAATGGCAGTAAACATGAAATATATAGATCCAACATACATGATTCGAGCTATTCCGAGTATTGCATCAGACAACATTTACTGCACTCTCCTTGCTCATAGCGCTGTTCATGGGGCTATGGCCGGGTACACCGGCTTCACGGTTGGCCCTGTAAACAGTAAACACGCATATATTCCAATTGCTCGTGTGACTGAGAAAACAAACACAGTGCAGCTGACAGACCGTATGTGGGCTAGGCTTCTTGCATCAACAAACCAACCAAGTTTTCTGACATCTAATGATTTGACTCAAGAAATTACAGTTGACAAAGAGACATTTCCATTAGACTTCTTCTTCCACTTCCTCAGGCCTCAGCCGCCATCATCATCGTCGAGAGCCACATCACCTGCTTCCTCTAGTAGTATAGACTTTTGGTGCAACCAAACCCCACACCCGGACCCATGCAAGCAATACTTCGTGAGCCGAACCCAACGGTTCAGACCGAAGGACGATTCGGAGTTCACGAGATTGCTGGTTCAACTAGCAATGGATCAGGCCCAGTTTATGCATAAACAGGCCCATGAATACGGCCCAAAATGCGTCACGAAAAACCAAAAATGCGTCTTCACGGATTGCCTAAAGCTCTACGACAACACCATCTTCCACCTGAACCAAaccctccaaaccctaaataataacaACGAATCGAGCTTCTCGCTTCTCCTCGACGCCCAAACATGGCTCAGCGCCGCCCTCACCAACATCGAGACCTGCCGGAGCGGCGCCGCGGAGCTGATCTCCGGCGGCGAAGTCTTCTCCGCCGCCGACGACGAAGCGAGCGACGGCGTGAGGAAGATGATAAGCAATGTGCTGGCGGTTAATCACGGGATGATACTGAGAACACAAGGTGAGATCGAGAGCGAGAATGCGAGATTGGAAGGAAATGGAGATGGATTTCCGATGTGGTTTCCGAGGCATGAGAGGAGGCTATTGAGGTCGAATTCTGGAATAGTGAAGGCGAATATTGTGGTGGCGAAGGATGGTTCGGGGCATTTTACGACGGTGCAGGCGGCAATCGATGCGGCGGCGAAGAGAAGAGTGAAGACGAGGTTTGTGATACGCGTGAAGAGAGGGATTTACGAAGAGAATATTGAGGTTGATAAGAATAATGTGAATCTTATGATTGTTGGTGATGGAATGAGGGTTACGATAATCACGAGTAGTAAGAGTACTCAAGATGGATTAACCACCTATAGCTCTGCAACTGCAGGCATAGATGGTCCTCGCTTCATTGCACGAGACATCACTTTCAGAAACACGGCTGGTCCTCAAAAGGGTCAAGCCGTGGCGCTCCGATCAGCCTCTGACCTCTCGGTCTTCTACCGCTGCGGCATCGAAGGTTACCAAGACACTCTGATGGCTCACGCCCAGCGCCAATTCTACCGGAACTGTAAAATCTCCGGCACGGTGGACTTCATCTTCGGCAACGCCGCAGTTGTGTTACAAAACTGCTTAATTCTCGCAAGAAAGCCCTTAGATGGCCAAGCCAACATGATTACGGCCCAAGGCCGAGGCGACCCATTCCAGAACTCCGGGATTTCAATAATCAATTCTCAGATTCGGGCCGACCCCGAGTTCAGGCCCGTAGCCCGTAAGTTCCAGACCTACTTGGGCCGGCCGTGGCAGCAATATGCGAGAGTGGTTGTCATGAAGACGTACATTGAAAGCCTGGTGAGCCCATTGGGCTGGTCTCCATGGGGCAATTCTAATTTTGCTCAAGATACGTTGTATTTTGGGGAATATGAGAATACTGGGCCTGGGTCATCTACAAAAGGGAGGGTAAGCTGGCCCGGGTTTCATGTCATTACAAGCCCAAAAGAGGCAGAACAGTTCACTGTGGGTAGCCTTCTTGCTGGTCGCACATGGTTACCTTCCACTGGGGTGCCTTTTACTTCTGgcatttaa 2181 0.4865 LIPESSFYLEGKGGLFDFIEERLKENGHLVIVLAEGAGQEYVAADVHAANEKDASGNRLLLDVGPWLSQKIKDHFTQDRKMAVNMKYIDPTYMIRAIPSIASDNIYCTLLAHSAVHGAMAGYTGFTVGPVNSKHAYIPIARVTEKTNTVQLTDRMWARLLASTNQPSFLTSNDLTQEITVDKETFPLDFFFHFLRPQPPSSSSRATSPASSSSIDFWCNQTPHPDPCKQYFVSRTQRFRPKDDSEFTRLLVQLAMDQAQFMHKQAHEYGPKCVTKNQKCVFTDCLKLYDNTIFHLNQTLQTLNNNNESSFSLLLDAQTWLSAALTNIETCRSGAAELISGGEVFSAADDEASDGVRKMISNVLAVNHGMILRTQGEIESENARLEGNGDGFPMWFPRHERRLLRSNSGIVKANIVVAKDGSGHFTTVQAAIDAAAKRRVKTRFVIRVKRGIYEENIEVDKNNVNLMIVGDGMRVTIITSSKSTQDGLTTYSSATAGIDGPRFIARDITFRNTAGPQKGQAVALRSASDLSVFYRCGIEGYQDTLMAHAQRQFYRNCKISGTVDFIFGNAAVVLQNCLILARKPLDGQANMITAQGRGDPFQNSGISIINSQIRADPEFRPVARKFQTYLGRPWQQYARVVVMKTYIESLVSPLGWSPWGNSNFAQDTLYFGEYENTGPGSSTKGRVSWPGFHVITSPKEAEQFTVGSLLAGRTWLPSTGVPFTSGI 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2504 726 PANTHER PECTINESTERASE 206 725 - -
Sto4g2504 726 SMART PMEI_2 209 365 IPR006501 GO:0004857
Sto4g2504 726 Pfam Pectinesterase 413 711 IPR000070 GO:0030599|GO:0042545
Sto4g2504 726 CDD PMEI-like_3 217 369 - -
Sto4g2504 726 Gene3D Invertase/pectin methylesterase inhibitor family protein 209 369 IPR035513 -
Sto4g2504 726 SUPERFAMILY Phosphofructokinase 1 180 IPR035966 GO:0003872|GO:0006096
Sto4g2504 726 ProSitePatterns Pectinesterase signature 2. 558 567 IPR033131 -
Sto4g2504 726 PANTHER PECTINESTERASE 206 725 - -
Sto4g2504 726 SUPERFAMILY Pectin lyase-like 410 725 IPR011050 -
Sto4g2504 726 TIGRFAM PME_inhib: pectinesterase inhibitor domain 198 367 IPR006501 GO:0004857
Sto4g2504 726 Gene3D - 407 726 IPR012334 -
Sto4g2504 726 Pfam Plant invertase/pectin methylesterase inhibitor 213 364 IPR006501 GO:0004857
Sto4g2504 726 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 212 367 IPR035513 -
Sto4g2504 726 Gene3D Phosphofructokinase domain 1 105 IPR035966 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2504 Sto-Chr4 26411055 26418547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2504 198 726 Carbohydrate Esterase AT3G47400 54.004 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2504 K01051 - gmx:100807908 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2504 4 26411055 26418547 Sto4g2504 4 26411055 26418547 ECH