Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2492 ATGGGTGATTCTAGGGTTCCCCCACCTCAAGCCCCATATTTTCACCACCCAACCGCGGGTATCATCAAGAGGATTCGATTGGAGAACTTCATGTGCCATAGCAACCTCGAGATCGAGCTGGGAGAGTGGGTTAATTTCATTACTGGCCAAAATGGAAGCGGTAAGAGTGCAATCCTAACTGCATTATGTGTTGCATTTGGCTGTCGAGCAAAAGGGACTCAAAGAGCAACGACTCTGAAGGATTTTATAAAAACTGGCTGCAGTAATGCTGTCATTCATgtggaaattaaaaatgatggAGAGGATGCTTTTAAGCCAGAAATATACGGTAGTGTTATCACTGTAGAGCGTAGGATATCTGAATCAACAAGCTCCACTGTGTTAAAAGACTACCAAGGAAAGAAGATTGTCAGCCGGAAAGCAGAACTCCAGGAAATGGTGGAGCATTTTAATATTGATGTGGAAAATCCATGTGTAATTATGAGTCAAGACAAAAGCAGAGAATTTCTGCATTCAGGAAACGACAAAGATAAATTTAAGGCCACGCTTCTTCAACAAGTTGATGATCTTCTGGAAAGTGTTTTTAAAGGTTTGGAGCATGCTGTTGGGCTCCTTGGTGGATTAGAGACAACTATAAGACCTATTGAGAAGGAGCTTAATGAGCTGAAAGTCAAGATTACAAATATGGAACATGTTGAACAAATTTCTCTGCAGATTCAGCAGTTAAAGAAAAAGCTTGCCTGGTCATGGGTTTACGATGTTGACAAGCAACTTGAGGAACAAAGTTCAAAAATCGAAAAACTTAAGGACCGAATACCAACTTGTCAAGCAAAAATAGAGCGTTTGATTGAAGAACTTGGAGAACGCTTACTTAAGAAGAAATGTCATATCAAAAACATGTTTGAAAAGACAACCGAAGTGAAGCAGAAGAAGCAAAAACTACAACAATCTATATCCTTGGCTACAAAAGAAGTACTTGAAAAAGAACAAGAGTGCAAACGCATAACTAGCGGTGTTGAGAAGATGGTACGGCGTATTAGGACTCTTGAAGAACAAGTGCTGGATATTCGTGAGAAGCATGTGCAAAACACTCAGGCTGAAGAATCTGAGATAGAGGAGAGACTGAAGGGACTCCAAAACGAGGTTGATGCTGCTGATTTAGCTTTGAAAAGTTTGAGAGAAGAGGAGGCTATACTATCCGACAGTGTACAAAAACAAAGCAGTGAAATAAGAAAGATTGCTGATGAGATTGAAGATCACGGGAGAAGGTATCGTGATATATGCCATTCCATCCGTGAGATTAAACAACACCAAACCAACAAGGTTTCAGCTTTTGGAGGAGATAGAGTGATGAATCTACTGCGCATTATTGAGAGATACAATCGGAGGTTTAAGAGGCCACCTATTGGTCCAATTGGCGCCCATCTGAGCCTGGTTAACGGTGATAAGTGGGCTGTTGCTGCTGAACATGCAATTGGGAATAAGATGCTTAATTCTTTTATAGTGACTGATCATAAGGATTCTCTTCTTCTGAGAGAATGTGCAAGGGAAGCAAACTATGGTCACCTCCAAATTCTTATTTATGATTTTTCGAGACCACGATTGACTATACCATCACACATGCTTCCCCAAACAACACATCCATCAACTCTTTCTGTTTTACATTCAGAGAATGACACTGTGATTAATGTCTTAGTGGATCTGGGGAGTGTTGAGAGACAAGTTCTTGTTAGGGATTATGATGCTGGAAAAGTGGTTGCTTTTGACCAAAGGATCTCTAATCTAAAGGAGGTCTTCACCTCAGATGGATATAAAATGTTCTCTCGCGGTTCAGTGCAAACTGTTCTCCCGCCAAATAAAAGGCAGAGAACTAGTCGACTTTGTAGTTCTTTTGACAATCAAATTAACGTTCTTGAAAATGATGCAACCCGTGAACAAGAAGCAGCTAGTCACTTAAAGAGAAGTAAAAGGGAAGCAGAAGAAAAGCTGGAGGATCTTGATAGGAAGCTAAGACATGTAAAGAGGTTGTGTTCAAATGCGGGGAAGGATTTGTCTTCTAAGAGAATAGCATTTGAAGATGAAAAGAATCAGTATGCTGCAGCAAATCGTTCTTCACCTGCATCATCTGTTGATGAGATTCAACAAGAAATTTCAGAAGTTCAACAAGAtatacaaagaaagaaagacttATTGAAGGAGTGTCAGGGCAGGATGCACGAAGCAACGGCAAAAGCAGATGACCTTAAAGTATCATTTGAAGAACTATGTGCATCGGCACAAGAGGAGATTAGTGCCTTTGAGAAAGCAGAGAGTGAACTAATGCAGATTGAAAAGGACATGCGTTCAGCAGAAGAGGAGAAGGCTCATTATGATGGTGTCATGCAAAACAAGGTTCTCCCAGATATCAAGGAGGCAGAAGCACACTATCTGGAGCTTAAGCAGCAGCGAGAGGAATACAACAGAAAGGCTTCTATAATTTGCTGTGAGGATGAACTTCAATCTTTAGGAGGCTGCGAGGGAAGCACCCCAGAGCAACTCAGTGCACAGTTAGAAAGATTAACCCAGAGACTTAAGCGTGAGAGCCAAAGATACTCAGAATCAATTGATGATCTTAGAATGCTGTATGAGAAAAAGGAATGTAAGATTATGAGAAAGCAGCAAGCATACAAAGCCTATCGAGAGAAGTTGGATGCATGCCAGAGAGCCTTAGATTTACGAAGGAACAAGTTTCGCAGAAATGCAACGCTTTTGAGGCGTATGTTGTCTTGGGAATTTAATAACCATTTAGGGAAGAAGGGTTTCAGTGGACATATCACTGTCAATTATGAAGAAAAAACCCTTTCAATCAAGGTTCAGATGCCTCAAGATGCATCAGGATGCACTGTTCAAGACACTCGAGGGCTTTCAGGTGGGGAGCGTTCTTTTTCAACATTATGCTTTGCACTAGCGCTTCATAATATGACAGAATCCCCTTTCCGTGCCATGGATGAGTTTGATGTTTTTATGGATGCTGTCAGTAGAAAGATCAGCTTGGACACTCTTGTGGATTTTGCCGTGGAACAAGGATCACAATGGATATTTATTACCCCACATGATATAGGTATGGTTAAGCAGGGGGACAGAATAAAGAAGCAGCAAATGGCTGCTCCTCGTTCATGA 3159 0.4071 MGDSRVPPPQAPYFHHPTAGIIKRIRLENFMCHSNLEIELGEWVNFITGQNGSGKSAILTALCVAFGCRAKGTQRATTLKDFIKTGCSNAVIHVEIKNDGEDAFKPEIYGSVITVERRISESTSSTVLKDYQGKKIVSRKAELQEMVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKATLLQQVDDLLESVFKGLEHAVGLLGGLETTIRPIEKELNELKVKITNMEHVEQISLQIQQLKKKLAWSWVYDVDKQLEEQSSKIEKLKDRIPTCQAKIERLIEELGERLLKKKCHIKNMFEKTTEVKQKKQKLQQSISLATKEVLEKEQECKRITSGVEKMVRRIRTLEEQVLDIREKHVQNTQAEESEIEERLKGLQNEVDAADLALKSLREEEAILSDSVQKQSSEIRKIADEIEDHGRRYRDICHSIREIKQHQTNKVSAFGGDRVMNLLRIIERYNRRFKRPPIGPIGAHLSLVNGDKWAVAAEHAIGNKMLNSFIVTDHKDSLLLRECAREANYGHLQILIYDFSRPRLTIPSHMLPQTTHPSTLSVLHSENDTVINVLVDLGSVERQVLVRDYDAGKVVAFDQRISNLKEVFTSDGYKMFSRGSVQTVLPPNKRQRTSRLCSSFDNQINVLENDATREQEAASHLKRSKREAEEKLEDLDRKLRHVKRLCSNAGKDLSSKRIAFEDEKNQYAAANRSSPASSVDEIQQEISEVQQDIQRKKDLLKECQGRMHEATAKADDLKVSFEELCASAQEEISAFEKAESELMQIEKDMRSAEEEKAHYDGVMQNKVLPDIKEAEAHYLELKQQREEYNRKASIICCEDELQSLGGCEGSTPEQLSAQLERLTQRLKRESQRYSESIDDLRMLYEKKECKIMRKQQAYKAYREKLDACQRALDLRRNKFRRNATLLRRMLSWEFNNHLGKKGFSGHITVNYEEKTLSIKVQMPQDASGCTVQDTRGLSGGERSFSTLCFALALHNMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVEQGSQWIFITPHDIGMVKQGDRIKKQQMAAPRS 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2492 1052 Gene3D - 844 1048 IPR027417 -
Sto4g2492 1052 Coils Coil 361 395 - -
Sto4g2492 1052 Coils Coil 339 359 - -
Sto4g2492 1052 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 18 1052 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Sto4g2492 1052 Coils Coil 850 870 - -
Sto4g2492 1052 Coils Coil 311 331 - -
Sto4g2492 1052 Coils Coil 642 676 - -
Sto4g2492 1052 Gene3D - 21 288 IPR027417 -
Sto4g2492 1052 Coils Coil 710 744 - -
Sto4g2492 1052 Coils Coil 759 786 - -
Sto4g2492 1052 Coils Coil 875 902 - -
Sto4g2492 1052 CDD ABC_SMC6_euk 22 176 - -
Sto4g2492 1052 Pfam RecF/RecN/SMC N terminal domain 22 1044 IPR003395 -
Sto4g2492 1052 Coils Coil 802 822 - -
Sto4g2492 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 1040 IPR027417 -
Sto4g2492 1052 CDD ABC_SMC6_euk 956 1052 - -
Sto4g2492 1052 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 18 1052 - -
Sto4g2492 1052 Coils Coil 251 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2492 Sto-Chr4 26286274 26305163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2492 19 1052 Structural Maintenance of Chromosomes family AT5G61460 61.479 0.0 1261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2492 K22804 - zju:107414226 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2492 4 26286274 26305163 Sto4g2492 4 26286274 26305163 ECH