Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2486 ATGCCCTCTATGCATAGAATTTCTCCCTCCCTTTCAACTCTAGCTTCATGCTTTGTCCTATTCACATTTTTTGATGCCATTTCAGGACTCACACAAGAAGCTCAAGCTCTTCTCAAATGGAAACAAACCCTCCCAACCCAATCAATTCTGGACTCATGGCTCTCAAACTCCAGTGCATCTCAATCCCCATGTTCATGGCATGGCATTACATGtgattcttcttcctctgtCATTGAATTAAACTTGAACAACACTGGTCTTCAAGGTACCCTCCAACACTTGAACTTCTCTGCTTTTCCAAATCTTCTTCTCATTAATCTCAAATTCAACAAACTCACTCACACCATTCCAGAATCCATAGGCTTCCTCTCAAAACTCCAATTCCTTGACCTCAATAATAATGACCTCAATGGAACCATACCTCTTTCTCTTGCCAATCTCACCCAACTTTATGAGCTTGATCTTTCACATAATCACCTAACAGGAATATTAGACCCTCTTCTATTCCCTATTGGTGGTACTAATCACCCCAAAACTGGTCTAATTGGGATGCAAAATCTCTTGATTAGGGACAACCTTCTTGGTGGTACTATTCCAAAAGAAATAGCTAATATGAGGAATTTGACCATCTTAGCTTTAGATGGAAACAATTTCTATGGGTCTATTCCACCATCTCTAGGAAATTGTACACATCTAAGAAAACTCACTTTGGCTAACAATCATCTCTCAGGCATTATTCCTCCTGGTATTGGTAAGCTGATCAATCTCACTGATATTCGCCTTCACAATAATACTCTTCATGGTCATGTCCCTCAAGAATTTGGAAACCATTCTCCTTTAGTTGTCTTGCATCTTTATATGAACAACTTCACTGGCCATTTACCACCAAATGTGTGTAAAGGTGGTAAGCTTGTGAATTTCAGTGCTGCCTGCAATAGTTTCACTGGTCCTATACCAGTAAGCTTGAGAAACTGCACCAGTTTGTTTCGAGTTATAATCGATCATAACCGATTGACGGGTTATGCAGACCGGGATTTCGGGGTGTATCCTAACCTTACTTACATTGACTTCAGCTATAATAGAGTGCAAGGTGACCTCTCTTCCAATTGGGGTAGATGCAAAAACTTGCAGTCTCTTAAAATGGCTGGAAATTCAATAGGTGGCACTATTCCTGATGAGATCTTTCAGCTGAAACAACTGCAAAGGCTTGACCTTTCCTCGAACCGAATATCGGGTCGGATTCCTCTTCAAATTGGGAGTTCTTCCAGCTTGTATCATCTTGATCTGAGTAACAACAGTCTTTTTGGTATTATACCAACAAGCATTGGGAAGCTTACCAATTTGTGGTCTTTAGACCTTTCAATGAACAATCTAAGTGGACAAATCCCTTATCAAATAGGGGATTGCAACAAATTGGTGAGTTTAAATTTGAGTCACAATGATTTTAGTGGGAGAATCCCATACCAAATTGGAAATCTTgcaaagttattttattttttggacttGAGTTATAATTCACTTTCTGGAGAAATTCCTGTGGATCTTAGTAAGCTCAATAGTTTGGTATGCTTGAATATGTCTCACAATAATCTCTCAGGTTCCGTACCTAATTTCCTGAGTGGAATGATGAGTTTGTCAAGCATTAACCTTTCTTACAACAAAGATTTATGTGGAAGAATCCAAGGTTTGAGACCTTGCAATAATGTCTCAGATGAAAAATCACATGATGGAAGAAGTAACAAAAAGAAAGTTGTAATAGCTATAGCCATTGCTGGTGCTTTAGTAGGCACAATTTTTCTTTCATTGGTTTTAGTTGGGATTTTTGTTGTTCTCTACAAGAGAAACTCTAGATCAAATTCAGAACAATACTCTTCTGCCAAGAGGGAAAATCCATTTTCTATATGGCACTTTGATGGTAAAATCGTGTACGAAGAGATAATCGAAGCGACCGAGAACTTCAAAGAAAAGTACTGCATTGGGGAAGGAGCTTTTGGAAAAGTTTACAGAGTGGTAATGGCAGGTGGTGAAGTATTTGCCATAAAAAAGCTGAGATGTGAAGCAGAGGAGTTAGACATTGAGAGTATAAAATCCTTCAAGAGTGAGATCCAAGCCTTGACCAAAACCCGGCACAGGAACATAGTGAAGATGTATGGATTTTGCTCACAAGGGAGGATGCACACATTCTTGATTTATGAGTACATGGAAAGAGGGAGTTTGGGTGATATGCTGAGAAATGAGAAGGAAGCAATGGAATTGGATTGGGCTAAGAGGGTTGAGATAGTGAAAGGTGTAGCACAAGCTTTGTGTTATATGCATCATGATTGCAATCCACCAATTATTCACAGAGACATATCAAGCAACAATGTGTTACTGTCAAGAAATCTTGAAGCTCATGTCTCAGACTTTGGCACTGCAAGGTTCTTGAAGCATGATTCATCAACTTGGACTTCATTTGCTGGCACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGAAGTGACAGAGAAATGTGATGTGTTCAGCTTTGGCGTTTTGGCATTTGAGGTTGTGATGGGAAAGCATCCTTCTGATCTGATTTCCCATATACAAACATTTGGTGTTGAAAGCTTGAAGTTGAAGGAGATTGTAGATCCACGTTTGGCACCACCTTCAGAGAGTCACATTTTGACGAAGCTGGAATTGATTAGTGATGTAGCAATGTCATGTTtgcaaacaaaccctaaatctaggCCAACCATGCTAACCATAGCTCAGAAACTAGATGACTGA 2775 0.3874 MPSMHRISPSLSTLASCFVLFTFFDAISGLTQEAQALLKWKQTLPTQSILDSWLSNSSASQSPCSWHGITCDSSSSVIELNLNNTGLQGTLQHLNFSAFPNLLLINLKFNKLTHTIPESIGFLSKLQFLDLNNNDLNGTIPLSLANLTQLYELDLSHNHLTGILDPLLFPIGGTNHPKTGLIGMQNLLIRDNLLGGTIPKEIANMRNLTILALDGNNFYGSIPPSLGNCTHLRKLTLANNHLSGIIPPGIGKLINLTDIRLHNNTLHGHVPQEFGNHSPLVVLHLYMNNFTGHLPPNVCKGGKLVNFSAACNSFTGPIPVSLRNCTSLFRVIIDHNRLTGYADRDFGVYPNLTYIDFSYNRVQGDLSSNWGRCKNLQSLKMAGNSIGGTIPDEIFQLKQLQRLDLSSNRISGRIPLQIGSSSSLYHLDLSNNSLFGIIPTSIGKLTNLWSLDLSMNNLSGQIPYQIGDCNKLVSLNLSHNDFSGRIPYQIGNLAKLFYFLDLSYNSLSGEIPVDLSKLNSLVCLNMSHNNLSGSVPNFLSGMMSLSSINLSYNKDLCGRIQGLRPCNNVSDEKSHDGRSNKKKVVIAIAIAGALVGTIFLSLVLVGIFVVLYKRNSRSNSEQYSSAKRENPFSIWHFDGKIVYEEIIEATENFKEKYCIGEGAFGKVYRVVMAGGEVFAIKKLRCEAEELDIESIKSFKSEIQALTKTRHRNIVKMYGFCSQGRMHTFLIYEYMERGSLGDMLRNEKEAMELDWAKRVEIVKGVAQALCYMHHDCNPPIIHRDISSNNVLLSRNLEAHVSDFGTARFLKHDSSTWTSFAGTYGYAAPELAYTMEVTEKCDVFSFGVLAFEVVMGKHPSDLISHIQTFGVESLKLKEIVDPRLAPPSESHILTKLELISDVAMSCLQTNPKSRPTMLTIAQKLDD 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2486 924 ProSitePatterns Tyrosine protein kinases specific active-site signature. 779 791 IPR008266 GO:0004672|GO:0006468
Sto4g2486 924 Gene3D Ribonuclease Inhibitor 312 575 IPR032675 -
Sto4g2486 924 Gene3D Ribonuclease Inhibitor 27 108 IPR032675 -
Sto4g2486 924 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Sto4g2486 924 Pfam Protein kinase domain 654 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2486 924 ProSiteProfiles Leucine-rich repeat profile. 149 170 IPR001611 GO:0005515
Sto4g2486 924 Pfam Leucine rich repeat 423 482 IPR001611 GO:0005515
Sto4g2486 924 PRINTS Leucine-rich repeat signature 150 163 - -
Sto4g2486 924 PRINTS Leucine-rich repeat signature 397 410 - -
Sto4g2486 924 ProSiteProfiles Protein kinase domain profile. 653 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2486 924 SUPERFAMILY RNI-like 237 557 - -
Sto4g2486 924 SMART LRR_typ_2 397 421 IPR003591 -
Sto4g2486 924 SMART LRR_typ_2 518 541 IPR003591 -
Sto4g2486 924 SMART LRR_typ_2 445 469 IPR003591 -
Sto4g2486 924 SMART LRR_typ_2 123 146 IPR003591 -
Sto4g2486 924 SMART LRR_typ_2 205 229 IPR003591 -
Sto4g2486 924 SMART LRR_typ_2 147 170 IPR003591 -
Sto4g2486 924 SMART LRR_typ_2 230 253 IPR003591 -
Sto4g2486 924 SUPERFAMILY Protein kinase-like (PK-like) 632 922 IPR011009 -
Sto4g2486 924 Gene3D Phosphorylase Kinase; domain 1 613 733 - -
Sto4g2486 924 ProSitePatterns Protein kinases ATP-binding region signature. 659 682 IPR017441 GO:0005524
Sto4g2486 924 Gene3D Ribonuclease Inhibitor 178 303 IPR032675 -
Sto4g2486 924 Gene3D Transferase(Phosphotransferase) domain 1 734 924 - -
Sto4g2486 924 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 16 923 - -
Sto4g2486 924 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Sto4g2486 924 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 16 923 - -
Sto4g2486 924 Gene3D Ribonuclease Inhibitor 109 170 IPR032675 -
Sto4g2486 924 SUPERFAMILY RNI-like 79 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2486 Sto-Chr4 26248697 26251673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2486 26 827 Receptor kinase-like Gene Family AT4G08850 39.717 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto4g2486 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2486 - - gmx:100813275 1174.46