Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2485 ATGGCCAAGCAAAGACTTTATTCCTTCTGTGTAATTCCTTGCTTGGCCTTGTGGACATTTTGTGAGTGCATCTCAGGACTAACACAAGAGGCTCAGGCTCTTCTCTACTGGAAACAGAGTCTCCCAAACCAACCAATTTTGGAGTCATGGGTCTCTCCACCACTCACCAACTCAACTGCATCTCAAAACCCATGTTCATGGCGTGGCATTACATGTGATTCTTCTGGTTCTGCGACTGAATTAAACTTGAACCACACTGGTCTTCAAGGTACCCTTCAACACTTCAACTTCTCTGCATTTccaaatcttcttcttcttaatctCAAGTTTAACCAACTCAGTGGCAGCATACCAGAAAGCATTGGTGTGCTCTCAAAACTTCAATTCCTTGACCTCAATAATAATGATCTCAGTGGCACTATACCTCTTTCTCTTGCTAATCTCACTCAACTTTATGAGCTTGATCTTTCAAAAAACAATATAACAGGAATATTAGATCCTTGCCTATTCCCTGATGGTACTGATCATCCCAAAACTGGCTTGATTGGGATAAAACATCTCCTCTTTCAAGACACCCTGCTTGGTGGTAGAATTCCAAATGAAATAGGGAATATGAGAGATTTGACTACTCTTTCTCTTGATGGGAGTCACTTCTTTGGCCCTATCCCACCATCTCTAGGCAATTGCACACATTTAAACAGTCTCACGTTGGCTGAAAACTACCTCTCAGGCATAATTCCTCCTAGTATTAGTAGATTGACCAATCTAACTGAGATTTTCCTCCACACAAACTATTTACATGGTCATGTGCCTCAAGAGTTTGGAAACCATTCATCTTTAGTTGCCCTGCATCTTGCAGAGAACTACTTCACAGGTCAATTACCACCACAAGTGTGCAAAGGTGGTAAGCTTGTGAATTTCAGTGCTGCCCATAATAGTTTCACCGGCCCAATCCCAGTAAGCCTAAAAAGTTGTCCTTCCTTATTAAGAGTTCGAATTGAAGATAACCAATTGACAGGCTATGCAGATCAAGATTTTGGAGTGCATCCTAATCTTACTTATATTGACTTCAGCTACAACAGAGTGAAAGGTGAGCTCTCAGCAAATTGGGGTGCATGCAAAAACCTGCAGTCACTTAGAATGGCAGGAAATTCAATAAGTGGCACTATTCCTGGAGAGATTCCTCCACAAGTAGGAAACTTCTCAAGCTTGTCTCTTCTAAATCTGAGTAATAACAAACTTTCTGGTTTAATACCGGAAAGCATTGGAAAGCTTACCAATCTTCAGTCTTTGGACCTGTCAATGAACATTCTAAGGGGCCCTATCCCTTATCAAATAGGGAGCTGCAAAAAATTGATAAGTTTGAATTTGAGCAAGAATGACTTCAATGGTACAGTTCCGTACCAAATTGGAAACCTTGCAGATTTGCAGTATTTTTTGGACTTGAGTTACAATTCACTTTCTGGAGAAATTCCCACTGATATTGTAAAGCTCACAAATTTGTTAAGCTTGAATGTCTCTCACAATAATTTCTCAGGCTCTATCCCTGATTCCCTCAGTGGAATGCCTGGTTTGTCAAGCATTAACCTCTCGTATAACAACTTGGAAGGTCCTGTACCTGATGGTGGCATATTTAATTCTTCTTTTCCACTGGATTTGAGtaacaacaaaaatttatgTGGAAAGATCCAAGGCTTACAACCTTGCAGTGTCTCAGTCATAGAACCAAAAGCCAGCATGAAAAAGCCATTTTCAATATGGTATTTCAATGGCAGAGTTGTGTATGAAGACATAATTGAAGCAACCGAGGGGTTTGATGACAAGTACTGCATTGGGGAGGGAGCTTTTGGAAATGTTTACAAAGTGGTAATGGCAGGGGGTGAAGTATTTGCTGTAAAAAAATTGAGATGTGAAGCAGAAAACTTAGACATTCAGAGTATAAAAGCCTTCAAGAGCGAGATAGAAGCCTTGACAGAAACACGCCACAGGAACATAGTGAAGCTATATGGATATTGCACACATTGGTCACACACGTTTTTGATATATGAGTACATGGAAAGAAGGAGTTTAGCTGATATGTTGGGAAACGACAAAGAAGCATCAGAGTTAGGTTGGTCAGAGAGGGTTGAAATTGTGAAAGGTGTAGCACAAGCTTTATGTTATATGCATCATGATTGTAATCCACCAATCGTCCACAGAGACATATCAAGCAAGAATGTTTTATTGTCCAGAAATCTTGAAGCTCATGTCTCAGATTTTGGTACAGCAAGGTTCCTGAAGGCAGATTCACCTATTTGGACTTCCTTTGCTGGCACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGCAGTGAGTGAGAAATGTGATGTGTTTAGCTTTGGTGTTTTGGTTTTTGAGGTTCTGATGGGAAAACATCCTGCTGATCTAATTTCCCATATACAAAGTTGTAGTATCCAAAACATGGACTTCACAGAGATCTTAGACCCACGTGTGTCAGTGGCAGCAACAAAGGAGCAGAATTTATTACAGAAATTGAGTTTGATTGGTAATTTAGCTGTTTCATGTTTACAAACAAACCCTCAATCTCGGCCATCCATGCGAACCATAGCCCACATGATTGAAAAGGCAACTGCTCATGAAACAAGAATGATTCCAGTATGA 2667 0.4004 MAKQRLYSFCVIPCLALWTFCECISGLTQEAQALLYWKQSLPNQPILESWVSPPLTNSTASQNPCSWRGITCDSSGSATELNLNHTGLQGTLQHFNFSAFPNLLLLNLKFNQLSGSIPESIGVLSKLQFLDLNNNDLSGTIPLSLANLTQLYELDLSKNNITGILDPCLFPDGTDHPKTGLIGIKHLLFQDTLLGGRIPNEIGNMRDLTTLSLDGSHFFGPIPPSLGNCTHLNSLTLAENYLSGIIPPSISRLTNLTEIFLHTNYLHGHVPQEFGNHSSLVALHLAENYFTGQLPPQVCKGGKLVNFSAAHNSFTGPIPVSLKSCPSLLRVRIEDNQLTGYADQDFGVHPNLTYIDFSYNRVKGELSANWGACKNLQSLRMAGNSISGTIPGEIPPQVGNFSSLSLLNLSNNKLSGLIPESIGKLTNLQSLDLSMNILRGPIPYQIGSCKKLISLNLSKNDFNGTVPYQIGNLADLQYFLDLSYNSLSGEIPTDIVKLTNLLSLNVSHNNFSGSIPDSLSGMPGLSSINLSYNNLEGPVPDGGIFNSSFPLDLSNNKNLCGKIQGLQPCSVSVIEPKASMKKPFSIWYFNGRVVYEDIIEATEGFDDKYCIGEGAFGNVYKVVMAGGEVFAVKKLRCEAENLDIQSIKAFKSEIEALTETRHRNIVKLYGYCTHWSHTFLIYEYMERRSLADMLGNDKEASELGWSERVEIVKGVAQALCYMHHDCNPPIVHRDISSKNVLLSRNLEAHVSDFGTARFLKADSPIWTSFAGTYGYAAPELAYTMAVSEKCDVFSFGVLVFEVLMGKHPADLISHIQSCSIQNMDFTEILDPRVSVAATKEQNLLQKLSLIGNLAVSCLQTNPQSRPSMRTIAHMIEKATAHETRMIPV 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2485 888 SMART LRR_typ_2 253 277 IPR003591 -
Sto4g2485 888 SMART LRR_typ_2 124 147 IPR003591 -
Sto4g2485 888 SMART LRR_typ_2 401 424 IPR003591 -
Sto4g2485 888 SMART LRR_typ_2 425 449 IPR003591 -
Sto4g2485 888 SMART LRR_typ_2 148 172 IPR003591 -
Sto4g2485 888 SMART LRR_typ_2 498 522 IPR003591 -
Sto4g2485 888 Pfam Leucine rich repeat 400 436 IPR001611 GO:0005515
Sto4g2485 888 Pfam Leucine rich repeat 480 535 IPR001611 GO:0005515
Sto4g2485 888 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Sto4g2485 888 Pfam Leucine rich repeat N-terminal domain 29 73 IPR013210 -
Sto4g2485 888 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515
Sto4g2485 888 SUPERFAMILY Protein kinase-like (PK-like) 580 875 IPR011009 -
Sto4g2485 888 PRINTS Leucine-rich repeat signature 404 417 - -
Sto4g2485 888 PRINTS Leucine-rich repeat signature 425 438 - -
Sto4g2485 888 SUPERFAMILY RNI-like 76 271 - -
Sto4g2485 888 Gene3D Ribonuclease Inhibitor 26 171 IPR032675 -
Sto4g2485 888 ProSiteProfiles Protein kinase domain profile. 605 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2485 888 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 391 572 - -
Sto4g2485 888 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 578 877 - -
Sto4g2485 888 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 394 - -
Sto4g2485 888 Gene3D Transferase(Phosphotransferase) domain 1 685 886 - -
Sto4g2485 888 ProSitePatterns Protein kinases ATP-binding region signature. 611 634 IPR017441 GO:0005524
Sto4g2485 888 Gene3D Phosphorylase Kinase; domain 1 574 684 - -
Sto4g2485 888 Pfam Protein kinase domain 608 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2485 888 SUPERFAMILY RNI-like 245 559 - -
Sto4g2485 888 Gene3D Ribonuclease Inhibitor 394 573 IPR032675 -
Sto4g2485 888 Gene3D Ribonuclease Inhibitor 172 393 IPR032675 -
Sto4g2485 888 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 578 877 - -
Sto4g2485 888 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 391 572 - -
Sto4g2485 888 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 4 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2485 Sto-Chr4 26239834 26242796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2485 97 778 Receptor kinase-like Gene Family AT4G08850 40.613 2.82e-174 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto4g2485 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2485 - - aprc:113866080 1184.47