Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2480 ATGGCCCAACATACAGCTTCTTCTATCCTCCTTGCAATGGTTCTGTGGTTACTTCCACTTTGTGAGGCCACTTCAGGACTCACACAAGAAGCTCAAGCTCTTCTCAAATGGAAACAAACCCTCCCAACCCAATCAATTCTGGATTCATGGCTCTCAAACTCTACTGCATCTCAATCTCCATGTTCATGGCATGGCATTACATGtgattcttcttcctctgtCATTGAATTAAACTTGAGCAACACTAGTCTTCAAGGTACCCTTCAACACCTCAACTTCTCTGCTTTTCCAAACCTCCTCCTTCTTGATCTCAACTATAACCATCTCACTGGCATCATACCTGAAACCATAGGGTTGCTCTCAAAACTCCAATTCCTAGACCTTAATATTAATCATCTCAATGGTACTTTGCCTCTTTCTCTGGCTAATCTCACTCAACTTTATGAGCTTGATCTTTCTGAGAACAACATTACAGGAATATTAGACCCTAGTCTATTCCCTGAGGGCATTGAAAGACCCAAATCTGGCCTTATTGGAATGAAGTACCTCCTGCTTCATGACAACCTATTGTGGGGTAGAATCCCAAATGAAATAGGGAATTTAAGAGATCTGACTATTCTGCAACTTGATGCAAATGGATTCTTTGGCCCTATTCCACCATCTCTAGGCAATTGTACACATTTAGAAGTTCTAACAATGCCTGAAAACCATCTCTCAGGCATAATTCCTCCAAGTATTGGTAGATTGACCAATCTAAGTGAAGTGCGCTTCCACACAAACAATCTATATGGTCATTTGCCACAAGAATTTGGGAACTTCTCAGCTTTGACTATCCTGCTTCTTTCTAACAACAACTTCAGTGGCCAATTACCACCCCAAGTGTGCAGAGGTGGTAAGCTTGTCAATTTCACTGCAGCCTACAATAGTTTTTCTGGTCCAATCCCAATAAGCCTGAGAAATTGCAATTCTTTATACAGAGTTCGATTTGAACATAACCAGCTCACAGGTTATGCTCAGGATTTTGGAGTATATCCTAATCTTAATTACATTGACTTCAGTTACAATAGAATGCAAGGTCAGCTCTCCAACAGTTGGAGTGCCTGCAAAAACTTGCAATCTCTTAAAATGGCTGGAAATTCAATAAGTGGCACTATTCCTGGTGAGATCTTTCAATTGAAACAACTTCAAAAGCTTGACTTGTCCTCGAACCGAATTTCGGGTGAGATTCCTCCACAAATTGCAAGTTCCTCTCGCTTGTATCTTTTAAACTTGAGCAGCAATAATCTTTCTGGTATGGTACCCTCAGGCATTGGAAAGCTTTCCAATTTGGAGATTTTGGACCTCTCAGCAAACTTGCTAAGAGGAGCAATCCCTTATCAAATAGGTGATTGCTATAAATTGCTGAGTTTCAACTTGAGCAATAATGACTTCACTGGCACTATCCCATATCAAATTGGAAACCTTGCATCCTTAATAGATTTTCTGGACTTGAGTTACAATTCACTTTCTGGAGAAATCCCTGTGGATCTTAGTAAGCTCAACAATTTGATGTGCTTGAATATGTCTCGCAACAATCTATCAGGCTCTATACCCAATTCTTTTGGTGCAATGTTGAGCTTGTCTAGCATCAACCTCTCCAACAACAATTTGGAGGGTCCTGTGCCTAATAGTGGCATATTTAATTCTTCTTTTCCACTAGATTTGAGTGGTAATAAAGATTTATGTGGGAAGATCCAAGGTTTGAGACCTTGCAATGTCTTGGTGATAAAACAAGATGGTGGCAGTAACAGACACAGAGTTGTAATTGTAATAGTCACAGTTGCTTCTTCAGTAGCTTCCCTATTTGTGTCATTGGTGTTAGTtggaatttttgtttttctctctAAGAGAAAATCAAGAGCTCCAGAACAGGTCTCAATCTCATCATCCAAGAGAGAAAATCCATTTTCTGTATGGCACTTCGATGGGAGAATTGTTTATGAGCAGATTATTGAAGCAACTGAGAACTTTGATGACAAGTTTTGCATTGGAGAGGGTGCCTTCGGAGAAGTTTACAAAGTGGTTATGTCTGGTGGGAAAGAGTATGCTATAAAAAAGCTGAGATGTGAAGCAGATGAGTTAGACATGGAGAGCATAAAAGCCTTCAAGAGTGAAATAAAAGCCTTGACAGAAACTCGCCACCGGAACATCGTGACGCTGTACGGATTTTGCTCACACGGGTTGCACACGTTCTTAGTTTATGAATGGATGGAAAGAGGGAGTTTAGGTGGTCTGCTAAGAAGTGAGGTAGAAGCAATGGAGTTAGATTGGGAAAAAAGGGTTGGAATTATCAAAGGAGTGGCACAAGCATTGTGTTATATGCATCATGATTGTAATCCTCCAATTATTCACAGAGACATATCAAGCAACAATATCCTATTGTCCTCAAATCTTGAAGCCCATGTCTCAGACTTTGGTGCAGCAAGATTCCTGAAGCCTGAATCATCAATTTGGACAACATTTGCTGGCACATACGGCTATGCTGCTCCAGAACTTGCATACACAATGTCAGTGAGTGAGAAATGTGATGTGTTTAgctttagtgttttggtttttGAGATTCTGATGGGAAAGCATCCTGCTGATCTGATTTCCCATATACAAACTTGTGAAGTCCAAAACATGAACTTCAAAGAGATATTAGACCCACGTCTGCCATCTCCTACAGAGGAACAGAATTTGAAGGAATTGGGTTTGATTGGGAATGTAGCAGTTTCTTGTTTACAAACCAATCCTCAATCTCGACCAACCATGCGAAGCATAGCTCAGGTGATTGAAATGGCGACTACTCATGAGATATGA 2841 0.3977 MAQHTASSILLAMVLWLLPLCEATSGLTQEAQALLKWKQTLPTQSILDSWLSNSTASQSPCSWHGITCDSSSSVIELNLSNTSLQGTLQHLNFSAFPNLLLLDLNYNHLTGIIPETIGLLSKLQFLDLNINHLNGTLPLSLANLTQLYELDLSENNITGILDPSLFPEGIERPKSGLIGMKYLLLHDNLLWGRIPNEIGNLRDLTILQLDANGFFGPIPPSLGNCTHLEVLTMPENHLSGIIPPSIGRLTNLSEVRFHTNNLYGHLPQEFGNFSALTILLLSNNNFSGQLPPQVCRGGKLVNFTAAYNSFSGPIPISLRNCNSLYRVRFEHNQLTGYAQDFGVYPNLNYIDFSYNRMQGQLSNSWSACKNLQSLKMAGNSISGTIPGEIFQLKQLQKLDLSSNRISGEIPPQIASSSRLYLLNLSSNNLSGMVPSGIGKLSNLEILDLSANLLRGAIPYQIGDCYKLLSFNLSNNDFTGTIPYQIGNLASLIDFLDLSYNSLSGEIPVDLSKLNNLMCLNMSRNNLSGSIPNSFGAMLSLSSINLSNNNLEGPVPNSGIFNSSFPLDLSGNKDLCGKIQGLRPCNVLVIKQDGGSNRHRVVIVIVTVASSVASLFVSLVLVGIFVFLSKRKSRAPEQVSISSSKRENPFSVWHFDGRIVYEQIIEATENFDDKFCIGEGAFGEVYKVVMSGGKEYAIKKLRCEADELDMESIKAFKSEIKALTETRHRNIVTLYGFCSHGLHTFLVYEWMERGSLGGLLRSEVEAMELDWEKRVGIIKGVAQALCYMHHDCNPPIIHRDISSNNILLSSNLEAHVSDFGAARFLKPESSIWTTFAGTYGYAAPELAYTMSVSEKCDVFSFSVLVFEILMGKHPADLISHIQTCEVQNMNFKEILDPRLPSPTEEQNLKELGLIGNVAVSCLQTNPQSRPTMRSIAQVIEMATTHEI 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2480 946 Gene3D Phosphorylase Kinase; domain 1 630 749 - -
Sto4g2480 946 SUPERFAMILY RNI-like 76 451 - -
Sto4g2480 946 Pfam Protein kinase domain 675 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2480 946 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Sto4g2480 946 SMART LRR_typ_2 392 416 IPR003591 -
Sto4g2480 946 SMART LRR_typ_2 144 168 IPR003591 -
Sto4g2480 946 SMART LRR_typ_2 537 562 IPR003591 -
Sto4g2480 946 SMART LRR_typ_2 120 143 IPR003591 -
Sto4g2480 946 SMART LRR_typ_2 440 464 IPR003591 -
Sto4g2480 946 SMART LRR_typ_2 513 536 IPR003591 -
Sto4g2480 946 SMART LRR_typ_2 273 297 IPR003591 -
Sto4g2480 946 SMART LRR_typ_2 249 272 IPR003591 -
Sto4g2480 946 SMART LRR_typ_2 96 119 IPR003591 -
Sto4g2480 946 Gene3D Ribonuclease Inhibitor 338 587 IPR032675 -
Sto4g2480 946 ProSiteProfiles Leucine-rich repeat profile. 146 167 IPR001611 GO:0005515
Sto4g2480 946 Gene3D Ribonuclease Inhibitor 171 337 IPR032675 -
Sto4g2480 946 ProSiteProfiles Leucine-rich repeat profile. 394 416 IPR001611 GO:0005515
Sto4g2480 946 PRINTS Leucine-rich repeat signature 147 160 - -
Sto4g2480 946 PRINTS Leucine-rich repeat signature 440 453 - -
Sto4g2480 946 SUPERFAMILY Protein kinase-like (PK-like) 648 939 IPR011009 -
Sto4g2480 946 ProSiteProfiles Protein kinase domain profile. 670 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2480 946 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 4 941 - -
Sto4g2480 946 Gene3D Transferase(Phosphotransferase) domain 1 750 945 - -
Sto4g2480 946 SUPERFAMILY L domain-like 434 587 - -
Sto4g2480 946 ProSitePatterns Protein kinases ATP-binding region signature. 676 699 IPR017441 GO:0005524
Sto4g2480 946 ProSitePatterns Tyrosine protein kinases specific active-site signature. 795 807 IPR008266 GO:0004672|GO:0006468
Sto4g2480 946 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 941 - -
Sto4g2480 946 Gene3D Ribonuclease Inhibitor 26 169 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2480 Sto-Chr4 26189769 26192681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2480 72 843 Receptor kinase-like Gene Family AT4G08850 43.830 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto4g2480 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2480 - - aprc:113866080 1252.27