Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2479 ATGGGCGAGGCTAAAGACCAAAGACGAACGCAGGTgcctaggGCTATCTGCCACCCTGTTCCCCTTCTCTACGGTCTTCAAGGTACCCTTCAAAACTTCAACTTCTCTGCATTTccaaatcttcttcttctcaatcTCAATTCCAACAGTCTCATTGGAATCATACCTGAAACCATTGGGTTGCTCTTGAAACTTGAATATCTTGACCTCAGTAATAATAATCTCACTGGCAATTTACCTCTTTCTCTTGCCAATCTCACACAACTCTATGTTCTAGACCTTTCTAGAAACAACATAACTGGGATATTGGACTCTGGTCTATTCCCAAACACCACTGAAAATCCCAAAACTGGTCTAATTGGGATCCAAACACTCCTCTTGCAGTACACCCTACTTGGTGGTACAATCCCTTATGAGATAGGGAATGCAAGGAATTTGAGTGTTCTAGCACTAGATGGGAATAGCTTTTATGGGCCAATTCCACCATCTCTAGGGAATTGTACAAATTTAAGCAGTCTCACACTCACTGAAAATAGCCTCTCAGGTGTTATTCCTCCTAGCCTTGCTAGATTGACCAATCTGTTTCGGGTTAGACTCTTCAGGAACAAGTTACATGGCCATGTGCCCCAAGAATTTGGGAACCATTCTTCTTTGAGTTTCTTTGGACTTGGTGAGAATAACTTCAGTGGAGAATTACCACCACAGATGTGCAAAAATGGTAAGCTTGTGAGATTCAATGCAGCATACAACAGCTTCACCGGCCCGATCCCGGTTAGCCTAAGAAACTGCACAACCTTAGCCAGAGTTCGGATGGAACATAACCGATTTACCGGTTGTGCAGACCGAGATTTTGGAGTATATCCTGATCTTTATTACATTGACTTCAGCTATAATAGAGTGCAAGGTCAGGTATCTTCCAACTGGGGTGCCTGCAAGAACTTGCAGTCTCTTAAAATGGCTGGAAATTCAATAAGTGGCACTATTCCTAGTGATATCTTTCAGCTGAAGCAACTGCAAAGTCTTGACCTTTCCTCAAACCGAATATTGGGTGAGATTCCTCCACAAATTGGGAATTCCTCCAACTTGTACCTTCTGAATTTGAGTAGCAACAATCTTTCGGGTACGATACCGGCTGGCATTGGACAGCTTTCTAATTTGCAATCTTTGGACTTGTCAGCAAACATGCTCAAGGGACCAATCCCTTATCAGATAGGAGATTGCTACAAATTgctgaatttgaatttgagtaatAATGACTTCAATGGTAGTATCCCTTATCAAATTGGAAGCCTTGCAAACTTGATAGATTTCTTGGACTTGAGTTATAATTCACTTTCTGGAGAAATCCCTGTGGATTTTAGTAAGCTCAACAATTTGATGAGCTTGAATATGTCTCACAATAATCTATCAGGCTCTATTCCAGATTCCCTTGGTGAAATGTTGAGCTTATCAAGCATCAACCTCTCATACAACAATTTGGAGGGTGCTGTACCTATAGATGGCATATTCAATTCTTCATATCCAATAGATTTGAGTAATAACAAAGATTTATGTGGGAGGATCCAAGGTCTTAGACCTTGCAATGGTACAGCTGAAAAACAACATGGTGGAAGTAGTAACAAACAAAAGGTTATTATAGCCATTATTGTTGCCTTTTTAGTAGGTACACTATTTCCTTCCTTCTTGTTCATCGCCATAACTCGCTCGAAGAAAATGTCGAGAGCTTCGGAACAGGTCTCTCCAGCCAGCAGGGAAAATCCATTTTCAATATGGCACTTTGATGGAAGAATTGTGTATGAAGAGATCATTGAAGCAACTGAGAATTTTGATGACAAGTACTGGATTGGGGAAGGAACTTTTGGAAAAGTTTACAAGGCAGTAATGGTAGGTGGTGAAGTGTTTGCTATAAAAAAGTTGAGAtgtgaagaagatgatgtagACATTGAGAGTTTAAAATCTTTTGAGAATGAGATCCAAGCCTTGACGAAAATTCGCCACAGGAACATAGTGAAGATGTATGGATTTTGCTCACAAGGGAGGATGCACACATTCTTGATTTATGAGTACATGGAAAGAGGGAGTTTGGGTGATATGCTGAGAAATGAGAAGGAAGCATTGGAATTGGATTGGCCTAAGAGGGTTGAGATAGTGAAAGGAGTAGCACAAGCTTTGTGTTATATGCATCATGATTGTAATCCACCAATTGTTCACAGAGACATATCAAGCAACAATGTGTTACTGTCAAGAAATCTTGAAGCTCATGTCTCAGACTTTGGAACTGCAAGGTTCATGAAGCATGATTCATCAGTATGGACATCATTTGCTGGCACATATGGCTATTCTGCTCcagAGCTTGCATACACAATGGGAGTGAGTGAGAAATGTGATGTGTTTAGCTTTGGTGTTTTGGCTTTTGAGATTCTGATGGGAAGGCATCCTTCTGATCTGATTTCCCACATACAAACTTGTGAAGTCCAAAACATGAAGTTGAAAGAGATATTAGACCCACGTTTGGCAGTTCCTACAGAAGAACAGAATTTGAAGGAATTGGGCAAAAATCTTATCGAGAAGGATCTAATTCGATGCATTGGGGATGGTAGGTCGACGGCGGTGTGGGGTGATGCATGGATTCCAGTGTGGGAGGCAAGGAATGCAGTGAAATTCTCGGGTACAAGCTTTCGAGTTGATCAGTTCTGGTGTAGAGTGGCAGCAATGTGGGAAGAGATCCAAGATTCAAAATCTTGGAAGGAATGGAATGATGTGTTTGGAAGACATTTGAGGTGGGAGAAGCCAATGGAGGGGATGGTTAAAATTAATACTGATGCAAGCACTTTACTAGGAGGAGGTGGGGTGATTGGTGGACTTATACGTGACAGCGTTGGGGTTTGTGAGGCAGCCTTTACCGAACGGACAATGATGGTGAGTAACCCGATGGTGTTGGAAGCAGATGCCATCAGGAAGGGGATGGAGGTAGCACTGAGGTTGGGGTATGGTAGAGTTGTGGTTGAAACGGATGCAAAGGCTGTCATGGATCAATTGGAGAATGCGGATGCCACCTTGTCTCCACTGCGAGCTTCTTGTCAGCAAATTAAAATGCTCATATCTTCTTTTAATAGTGTTGAGTTTGTTTGGGTGCCTAGATGTTGTAATAAGGCATCCcactttcttatttcttttgcaAAAGATTATGTTCAGGATAACTTGTGGACAGATCAGTTGCCAAGTTTCCTTTCAGATGTATTACGTCTTGACTTTTAG 3258 0.4061 MGEAKDQRRTQVPRAICHPVPLLYGLQGTLQNFNFSAFPNLLLLNLNSNSLIGIIPETIGLLLKLEYLDLSNNNLTGNLPLSLANLTQLYVLDLSRNNITGILDSGLFPNTTENPKTGLIGIQTLLLQYTLLGGTIPYEIGNARNLSVLALDGNSFYGPIPPSLGNCTNLSSLTLTENSLSGVIPPSLARLTNLFRVRLFRNKLHGHVPQEFGNHSSLSFFGLGENNFSGELPPQMCKNGKLVRFNAAYNSFTGPIPVSLRNCTTLARVRMEHNRFTGCADRDFGVYPDLYYIDFSYNRVQGQVSSNWGACKNLQSLKMAGNSISGTIPSDIFQLKQLQSLDLSSNRILGEIPPQIGNSSNLYLLNLSSNNLSGTIPAGIGQLSNLQSLDLSANMLKGPIPYQIGDCYKLLNLNLSNNDFNGSIPYQIGSLANLIDFLDLSYNSLSGEIPVDFSKLNNLMSLNMSHNNLSGSIPDSLGEMLSLSSINLSYNNLEGAVPIDGIFNSSYPIDLSNNKDLCGRIQGLRPCNGTAEKQHGGSSNKQKVIIAIIVAFLVGTLFPSFLFIAITRSKKMSRASEQVSPASRENPFSIWHFDGRIVYEEIIEATENFDDKYWIGEGTFGKVYKAVMVGGEVFAIKKLRCEEDDVDIESLKSFENEIQALTKIRHRNIVKMYGFCSQGRMHTFLIYEYMERGSLGDMLRNEKEALELDWPKRVEIVKGVAQALCYMHHDCNPPIVHRDISSNNVLLSRNLEAHVSDFGTARFMKHDSSVWTSFAGTYGYSAPELAYTMGVSEKCDVFSFGVLAFEILMGRHPSDLISHIQTCEVQNMKLKEILDPRLAVPTEEQNLKELGKNLIEKDLIRCIGDGRSTAVWGDAWIPVWEARNAVKFSGTSFRVDQFWCRVAAMWEEIQDSKSWKEWNDVFGRHLRWEKPMEGMVKINTDASTLLGGGGVIGGLIRDSVGVCEAAFTERTMMVSNPMVLEADAIRKGMEVALRLGYGRVVVETDAKAVMDQLENADATLSPLRASCQQIKMLISSFNSVEFVWVPRCCNKASHFLISFAKDYVQDNLWTDQLPSFLSDVLRLDF 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2479 1085 SUPERFAMILY Ribonuclease H-like 935 1066 IPR012337 -
Sto4g2479 1085 ProSitePatterns Protein kinases ATP-binding region signature. 615 638 IPR017441 GO:0005524
Sto4g2479 1085 Pfam Leucine Rich Repeat 64 86 IPR001611 GO:0005515
Sto4g2479 1085 Pfam Reverse transcriptase-like 949 1056 IPR002156 GO:0003676|GO:0004523
Sto4g2479 1085 Pfam Leucine rich repeat 337 396 IPR001611 GO:0005515
Sto4g2479 1085 Coils Coil 1078 1085 - -
Sto4g2479 1085 Gene3D Phosphorylase Kinase; domain 1 568 689 - -
Sto4g2479 1085 Gene3D - 935 1065 IPR036397 GO:0003676
Sto4g2479 1085 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 22 846 - -
Sto4g2479 1085 PRINTS Leucine-rich repeat signature 65 78 - -
Sto4g2479 1085 PRINTS Leucine-rich repeat signature 383 396 - -
Sto4g2479 1085 SUPERFAMILY L domain-like 28 107 - -
Sto4g2479 1085 SUPERFAMILY RNI-like 184 514 - -
Sto4g2479 1085 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 22 846 - -
Sto4g2479 1085 Gene3D Ribonuclease Inhibitor 23 112 IPR032675 -
Sto4g2479 1085 Gene3D Ribonuclease Inhibitor 113 202 IPR032675 -
Sto4g2479 1085 SUPERFAMILY L domain-like 117 209 - -
Sto4g2479 1085 ProSitePatterns Tyrosine protein kinases specific active-site signature. 735 747 IPR008266 GO:0004672|GO:0006468
Sto4g2479 1085 CDD RNase_H_like 957 1056 IPR044730 -
Sto4g2479 1085 Gene3D Transferase(Phosphotransferase) domain 1 690 861 - -
Sto4g2479 1085 Pfam Protein kinase domain 613 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2479 1085 ProSiteProfiles Protein kinase domain profile. 609 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2479 1085 SMART LRR_typ_2 383 407 IPR003591 -
Sto4g2479 1085 SMART LRR_typ_2 86 110 IPR003591 -
Sto4g2479 1085 SMART LRR_typ_2 38 61 IPR003591 -
Sto4g2479 1085 SMART LRR_typ_2 62 85 IPR003591 -
Sto4g2479 1085 SMART LRR_typ_2 456 480 IPR003591 -
Sto4g2479 1085 SMART LRR_typ_2 335 359 IPR003591 -
Sto4g2479 1085 ProSiteProfiles Leucine-rich repeat profile. 64 87 IPR001611 GO:0005515
Sto4g2479 1085 SUPERFAMILY Protein kinase-like (PK-like) 587 852 IPR011009 -
Sto4g2479 1085 Gene3D Ribonuclease Inhibitor 203 529 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2479 Sto-Chr4 26169061 26183408 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2479 19 783 Receptor kinase-like Gene Family AT4G08850 44.114 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto4g2479 Pkinase 8.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2479 - - gmx:100814345 1049.27