Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2475 ATGGCTCACCATACAATCTCTGTCCTCCTTGCAATTCCAGCAAGTTGCTTAGTTTTGTGGACACTTTTTGAGACCACTTCAGGACTCACACAAGAAGCTCAAGCTCTTCTCAAATGGAAACAAACCCTCCCAACCCAATCAATTCTGGATTCATGGCTCTCAAACTCTACTGCATCATCTCAAACCCCATGTTCATGGCATGGCATTACATGtgattcttcttcctctgtCATTGAATTAAACTTGAACAGCACTGGTCTTCAAGGTACCCTTCAACACTTGAACTTCTCTGCTTTTCCAAATCTCCTTATTCTCAATCTCAAATTCAACAATCTCACTGGAATCATACCTGAAACCATTGGGTTGCTCACAAAACTCCAATACCTTGACCTCAATCACAACTACTTCATTGGCAGTTTACCTCTTTCTCTTGCTAACCTCACTCAACTTTATATGCTTGACCTTTCAGTAAACAACATAACTGGGATATTAGACCCTAGTCTATTCCCTAACACCACTCATCAACCCAAAACTGGACTAATTGGGATGCAAAGACTTCTCTTTATGTTTACCCTTCTTGGTGGTACAATTCCAGATGAGATAGGGAATCTAAGAAATTTGACTATTCTAGCACTAGATGGGAATAGCTTTTATGGGCCAATTCCACCATCTCTAGGAAACTGTACACATTTAAGCATCCTCGCAATCCCTCAAAACAGTTTCTCAGGCATTGTTCCCTCTAGCCTTGGTAGCTTGACCAATCTAACTAGACTTAGACTCTTCAGTAACAAGTTGCATGGTCCTGTCCCACAGGAATTGGGGAATCATTCTTCTTTAAGTTTCCTTGAACTTTTTGAGAACAACTTCACTGGCCAATTACCACCTCAGGTGTGCAAAGGTGGTAAGCTTGAGAATTTCACTGCTTTCCACAATAGCTTCACTGGTCCAATCCCAATAAGCTTGAGAAATTGCACTACCTTAACTAGACTTCGAATTGAACATAACCAATTAACTGGTTATGCAGACCAAGATTTTGGAGTATATCCTAATCTTAATTACATTGACTTCAGCTATAATAGAGTGCAAGGTGACCTCTCTCCCAATTGGGGTAGCTGCAAGAACTTGCAGTATCTTAGTATGGCTGGAAATTCAATAGGTGGCACTATTCCTGCTGAGATCTTTCAGCTAAAACAACTGCAAAGCCTCGACCTTTCCTCGAATCGAATATCGGGTCAGATTCCTCCACAAATTGGGAATTCCTCAAGCTTGTACTTTCTAAACTTGAGTAGCAACAATCTCTCAAGTTTGATACCAGTAGGCATTGGGAAGCTTCTAAATCTGCAGTCTTTAGACCTATCAACAAACATGCTCTGGGGGCCAATCCCTTATCAAATAGGAGATTGCAAAGAAATGCTAGGATTAAACTTAAGCAACAATCACTTCAATGGCACTATCCCATATCAAATTGGAAACCTAGAAGCTTTGATGTATTTTCTGGACTTGAGTTATAATTCACTTTCTGGAGAAATCCCAGTGGATCTTAGTAACCTTAACAATTTGATAAGCTTGAATCTGTCTCACAATAATCTATCAGGCTCTATTCCTAATTCCTTAAGTACAATGATGAGCTTGTCAAGCATCAACCTCTCCCACAACAATTTGGAGGGTCTTGTACCTAATAGTGGCATATTCAATTCTTCCTATGAAGTGGATCTGAGTAACAACAAAGATTTATGTGGGAAGATCCATGGCCTAAGACCTTGCAATGTAACAGTTATTAGACAAGATGATGGAAGTAACAATAAAAAAGTTGTTATAGCCATCATTGCTTGTCTAGTAGGTGCAGTAGTCTTTGCTTTGTTGTTGTCCATTCGGGTTTTTCTCATTTGCTCTAAGAGAAACTCAAGAGCTTCAGAACAGTACTCTCCAAGCAAGACAGAGAATCCATTTTCAATATGGCACTTTGATGGTAGAATTGTGTATGAAGAGATCATTGAAGCAACCAAGAACTTCGACGACAAGTACTTCATTGGGGAGGGAGCTTTCGGAAAAGTTTACAAAGTGATCATGGCAAGTGGTGAAGTGTTtgctataaaaaaattgagatgtGAAGCAGATGAACTGGACACTGAGAGTATAAAAGCCTTCAAGAGTGAGATCGAAGCCTTGACCGAAACGCGCCACAAGAACATAGTGAAGATGTATGGATTTTGCTCACAAGGGAGGATGCACACATTCTTGATTTATGAGTACATGGAAAGAGGGAGTTTGGGTGATATGCTGAGAGATGAGAAGGAAGCATTGGAATTGGATTGGCCTAAGAGGGTTGAGATAGTGAAAGGAGTAGCACAAGCTTTGTGTTATATGCATCATGATTGCAATCCACCAATTGTTCATAGAGACATATCAAGCAACAATGTGTTATTGTCAAGAAATCTTGAAGCTCATGTGTCAGACTTTGGAACTGCAAGGTTCATGAAGCATGATTCATCAGTATGGACATCATTTGCTGGCACATATGGCTATTCTGCTCcagAGCTTGCATACACAATGGGAGTGAGTGAGAAATGTGATGTGTTTAGCTTTGGGGTTTTGGCTTTTGAGATTGTGATGGGAAAGCATCCTGCTGATCTGATTTCCCACATACAGAATTGTGAAGTCCAAGACATGAAGTTGAAAGAGATATTAGACCCACGTTTGGAACTTCCTACAGAGGAACAGAATTTGAAGGAATTGGGTTTGATTGCAGAGGCATTAGAATCTTCCGGAAACCCAAAACCTACGCAATGTAAAGTACAGAATTATCCAATTATGTTTCTTGATGGGCCAGGGTGCATTCTGGGCTGGACTGGATCTGATCCATTCCAGGAACAGTATGCTTTGGTGGGCCAACCAGCCCAATTCACAATGCTGAGTGGCTTTAACAACAATATTGGTTACCGGCAGTTTTAA 2952 0.4004 MAHHTISVLLAIPASCLVLWTLFETTSGLTQEAQALLKWKQTLPTQSILDSWLSNSTASSQTPCSWHGITCDSSSSVIELNLNSTGLQGTLQHLNFSAFPNLLILNLKFNNLTGIIPETIGLLTKLQYLDLNHNYFIGSLPLSLANLTQLYMLDLSVNNITGILDPSLFPNTTHQPKTGLIGMQRLLFMFTLLGGTIPDEIGNLRNLTILALDGNSFYGPIPPSLGNCTHLSILAIPQNSFSGIVPSSLGSLTNLTRLRLFSNKLHGPVPQELGNHSSLSFLELFENNFTGQLPPQVCKGGKLENFTAFHNSFTGPIPISLRNCTTLTRLRIEHNQLTGYADQDFGVYPNLNYIDFSYNRVQGDLSPNWGSCKNLQYLSMAGNSIGGTIPAEIFQLKQLQSLDLSSNRISGQIPPQIGNSSSLYFLNLSSNNLSSLIPVGIGKLLNLQSLDLSTNMLWGPIPYQIGDCKEMLGLNLSNNHFNGTIPYQIGNLEALMYFLDLSYNSLSGEIPVDLSNLNNLISLNLSHNNLSGSIPNSLSTMMSLSSINLSHNNLEGLVPNSGIFNSSYEVDLSNNKDLCGKIHGLRPCNVTVIRQDDGSNNKKVVIAIIACLVGAVVFALLLSIRVFLICSKRNSRASEQYSPSKTENPFSIWHFDGRIVYEEIIEATKNFDDKYFIGEGAFGKVYKVIMASGEVFAIKKLRCEADELDTESIKAFKSEIEALTETRHKNIVKMYGFCSQGRMHTFLIYEYMERGSLGDMLRDEKEALELDWPKRVEIVKGVAQALCYMHHDCNPPIVHRDISSNNVLLSRNLEAHVSDFGTARFMKHDSSVWTSFAGTYGYSAPELAYTMGVSEKCDVFSFGVLAFEIVMGKHPADLISHIQNCEVQDMKLKEILDPRLELPTEEQNLKELGLIAEALESSGNPKPTQCKVQNYPIMFLDGPGCILGWTGSDPFQEQYALVGQPAQFTMLSGFNNNIGYRQF 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2475 983 Pfam Leucine Rich Repeat 519 539 IPR001611 GO:0005515
Sto4g2475 983 SUPERFAMILY RNI-like 80 564 - -
Sto4g2475 983 SMART LRR_typ_2 147 171 IPR003591 -
Sto4g2475 983 SMART LRR_typ_2 444 468 IPR003591 -
Sto4g2475 983 SMART LRR_typ_2 99 122 IPR003591 -
Sto4g2475 983 SMART LRR_typ_2 517 540 IPR003591 -
Sto4g2475 983 SMART LRR_typ_2 252 276 IPR003591 -
Sto4g2475 983 SMART LRR_typ_2 204 228 IPR003591 -
Sto4g2475 983 SMART LRR_typ_2 396 420 IPR003591 -
Sto4g2475 983 SMART LRR_typ_2 541 566 IPR003591 -
Sto4g2475 983 SMART LRR_typ_2 123 146 IPR003591 -
Sto4g2475 983 ProSiteProfiles Protein kinase domain profile. 671 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2475 983 ProSitePatterns Protein kinases ATP-binding region signature. 677 700 IPR017441 GO:0005524
Sto4g2475 983 PRINTS Leucine-rich repeat signature 399 412 - -
Sto4g2475 983 PRINTS Leucine-rich repeat signature 517 530 - -
Sto4g2475 983 ProSitePatterns Tyrosine protein kinases specific active-site signature. 797 809 IPR008266 GO:0004672|GO:0006468
Sto4g2475 983 Gene3D Transferase(Phosphotransferase) domain 1 752 933 - -
Sto4g2475 983 SUPERFAMILY Protein kinase-like (PK-like) 646 885 IPR011009 -
Sto4g2475 983 Gene3D Ribonuclease Inhibitor 28 175 IPR032675 -
Sto4g2475 983 Pfam Leucine rich repeat 79 135 IPR001611 GO:0005515
Sto4g2475 983 Pfam Leucine rich repeat 326 385 IPR001611 GO:0005515
Sto4g2475 983 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Sto4g2475 983 Gene3D Ribonuclease Inhibitor 179 299 IPR032675 -
Sto4g2475 983 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 927 - -
Sto4g2475 983 Pfam Protein kinase domain 674 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2475 983 Gene3D Ribonuclease Inhibitor 302 593 IPR032675 -
Sto4g2475 983 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 4 927 - -
Sto4g2475 983 Gene3D Phosphorylase Kinase; domain 1 631 751 - -
Sto4g2475 983 ProSiteProfiles Leucine-rich repeat profile. 519 541 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2475 Sto-Chr4 26142010 26145897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2475 25 845 Receptor kinase-like Gene Family AT4G08850 40.109 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto4g2475 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2475 - - aprc:113866080 1192.18