LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto4g2457	ATGATCAGTAGTTCAGAACTCAAAATCCAGGAACCACAGATTTGGAGTTGGTTTTTGAACCAGTGGGTTTGTCTAGTTTACAGGTACAAACTGATAGAGTTCTTGGCTGAAGAAGCAAGTCAATCAAATGGTGTTCATAGAGAGATTGCGAGTGTCAAATATGAATTTGAGAGCATTCAGTCATTCCTCAAGGAGGCAGATAAAATAATGACTACATCAGGGGGAGACAACCACAGTGATGGCTtcagaacttgggtgaaacagtTTAGGGAAGAAGCTTTTCACATTGAAGATGTCATTGATGCATATATCTTTCAGAAGACGAAACGTTCTCATGGGGATAGAATCATACCTATAGGAGTCTTTTATCAGTTTTATAGGTTAGTTAAGAACTACAAGTTTCGCCATGATATGATCTCCgagattaaaaatataagattaaCTGTATGTGAAATCAAGGAAAGAAGTGAAAGATATAGGTTCGAATTCAATCTCCTTGAGCAAGAAGGATCGCGAACTCAGGCTCAGAATCGAATGTGGAATGACCCTCGGATGGCCTCTATTTTCCTTGAAGAAGCTGATGTTGTGGGGATTGAAACTCCAAGATCTCAGTTGGTTGGTTGGTTGACAACGGGATCTTCTCGGCGCACCGTGATTTCGGTGGTTGGCATGGGAGGTCTTGGTAAGACTACACTTACCAAGAAGGTTTATGATGATCACAGAGTCACATGTCACTTTGATTGCCTTGCCTGGGTCTCAGTTTCTCAGTCATATGACATGTCTGTCATAATGAGGACCATCATCAAGCAATTCTTCAAGGCAAGGAAGGAATTGATGCCAGAGGGATTTGACACAACAGATGAGGAACTTCTGATAAGGTTTGTGAGGGAATATATATACCATAAGAGGTACATGATTGTTTTTGATGATGTGTGGGATTTAGACTTTTGTGGCATCATTGAACATGCTTTTCCTGATAATAATAAAGGTGGGAGGATAGTGATTACAACAAGAATTAAGGACATAGCTATTTTTTGCAAGAGATCTTCGTTCGTTCATATCCAGGAGTTGCAGCCTCTTCCAGCAGAAAAAGCATGGGAGCTCTTTTGCAGAAAGGCATTCCAATTTGATTCTGAAGGGAAGTGTCCTCCTCCATTGATGAAATTGTCCCTGGAAATAGTTGACAAGTGCCAAGGCCTTCCTCTTGCAGTTGTGTCCATAGGTGGTCTTTTATCAACCAAAGATAAAGTTGTTTCTGAGTGGCAGAAGTTAAAAGACAGTCTCAGCTCGGAGTTAGAATCGAATCCTCATCTTGTCGGTATATCGAAAATCCTATCTCTCAGTTATCAGGATCTGCCTTATGATCTCAAATCATGCTTTCTGTACTTCGGCATATTTCCTGAGGGGCATTCTATTAATTGTGCAAGGTTAGTTAAGCTATGGATTGCTGAAGGCTtcataaaatcaagaaaagaCAAGGCTATAGAAGAGATTGCACAAGAATACTTGACCCAGCTAATCCACAGAAGCTTAATTCAAGTGTCTCTTGTCAGCTTTGAAGGAAAAGCCAGAAAATGCGGAGTGCATGACCTATTCCATGAGATTATCATTAAAAAGATGGAAGACACAAGTTTCTGTCTTGTTTTACGTGACGAATACGAATGCTCTCACTTCCATGGAAGGACTAGACGCTTATCAATAAATAGATGTTCACTTGCTGCTCTTGCTGATATCAAACACTCTCCGGTTCGCTCTCTCTTCATGTTTGACACAGAAGAATTTCCTCAAAAACTTCTTCTCACACTTCTTGCAAATTTTAAACTTCTGAGAGTATTGGATTTTGAAAATTCTTCTGTTGCTCATCTCCCTAATGATGTGGGCATTTTATTCCACTTGAGGTATCTCAGTTTGAGAAACACTAAAGTGGACAACCTTCCTAAGTCCATAAGTAAATTACAGAACTTAGATACTTTGGATCTGAAGAATTCCATGGTATATGAGATACCTAAACAGATCAACAGGCTTCTTAATTTACGATATCTTGCAGCTTGTCGTTACGACTATGACAAAGATTTCGGCTTTACTACTGAAAGAGGAATGAAGATACAAGAGGGTGTTGGAAGATTAACAACCCTGCAAAAGTTGTATCATTTAGAGGCAAATCATGGAGGGACAAAATTAATCAGTGAACTAAGAAACTTGAGGCAGTTAAGGAAACTAGGCATCAAACACTTGAGGAGTGAAGATGGGAGGATTCTATGTACCTCTATTGAAGCAATGAAGCACCTTGAATCTTTTGAAGTGTCTTCCTTGAGTGAAGAAGATTTCCTTGATCTGAACTCCATTACATCTCCTCCAAAATCCCTTCGTCGCCTCTACTTAAGAGGCCAGCTGCGAAAACTGCCAGATTGGATTGGAAAACTGGAAAATCTAGTGAAGGTGAGGATATTTTGGTCAAGATTGAAAAATAGTCCTCTTAAGGCACTTGAGAACCTACCTAGCTTATTGGAGCTAGGGTTCTCATATAAAGCATACGACGGCGAGGAACTTCGGTTCGAAGAAGGAGGGTTTCAAAAATTGAAGGTGTTAAAACTAAAAGACTTAGAAAGGTTGAGTTCACTTGTTATAGAAGAAGGAGCATTGCTTGTGTTACAAGACTTGCAAATAGGGCCTAGCCCTCAAATGAAGGAAGTGCCCTTTGGGATTCAGCATTTGAGAAAGTTGGTGTCTTTAAGATTCATCAATATGGCAGATGAGTTTGAAGCAAGCATGGACCCAAAAACAGGAAAAAGTTATGGGATTGTTAAGCATATTCCAAGTGTTCTCATTAGTCATAAGGTTGGGTCCAAACAAGATGTCTATGATACCTACAACCTACAATATCATGGAAACATCTGA	2898	0.3916	MISSSELKIQEPQIWSWFLNQWVCLVYRYKLIEFLAEEASQSNGVHREIASVKYEFESIQSFLKEADKIMTTSGGDNHSDGFRTWVKQFREEAFHIEDVIDAYIFQKTKRSHGDRIIPIGVFYQFYRLVKNYKFRHDMISEIKNIRLTVCEIKERSERYRFEFNLLEQEGSRTQAQNRMWNDPRMASIFLEEADVVGIETPRSQLVGWLTTGSSRRTVISVVGMGGLGKTTLTKKVYDDHRVTCHFDCLAWVSVSQSYDMSVIMRTIIKQFFKARKELMPEGFDTTDEELLIRFVREYIYHKRYMIVFDDVWDLDFCGIIEHAFPDNNKGGRIVITTRIKDIAIFCKRSSFVHIQELQPLPAEKAWELFCRKAFQFDSEGKCPPPLMKLSLEIVDKCQGLPLAVVSIGGLLSTKDKVVSEWQKLKDSLSSELESNPHLVGISKILSLSYQDLPYDLKSCFLYFGIFPEGHSINCARLVKLWIAEGFIKSRKDKAIEEIAQEYLTQLIHRSLIQVSLVSFEGKARKCGVHDLFHEIIIKKMEDTSFCLVLRDEYECSHFHGRTRRLSINRCSLAALADIKHSPVRSLFMFDTEEFPQKLLLTLLANFKLLRVLDFENSSVAHLPNDVGILFHLRYLSLRNTKVDNLPKSISKLQNLDTLDLKNSMVYEIPKQINRLLNLRYLAACRYDYDKDFGFTTERGMKIQEGVGRLTTLQKLYHLEANHGGTKLISELRNLRQLRKLGIKHLRSEDGRILCTSIEAMKHLESFEVSSLSEEDFLDLNSITSPPKSLRRLYLRGQLRKLPDWIGKLENLVKVRIFWSRLKNSPLKALENLPSLLELGFSYKAYDGEELRFEEGGFQKLKVLKLKDLERLSSLVIEEGALLVLQDLQIGPSPQMKEVPFGIQHLRKLVSLRFINMADEFEASMDPKTGKSYGIVKHIPSVLISHKVGSKQDVYDTYNLQYHGNI	965

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto4g2457	965	SUPERFAMILY	L domain-like	540	915	-	-
	Sto4g2457	965	Pfam	Rx N-terminal domain	30	112	IPR041118	-
	Sto4g2457	965	PANTHER	-	53	920	-	-
	Sto4g2457	965	PRINTS	Disease resistance protein signature	218	233	-	-
	Sto4g2457	965	PRINTS	Disease resistance protein signature	298	312	-	-
	Sto4g2457	965	PRINTS	Disease resistance protein signature	397	411	-	-
	Sto4g2457	965	PRINTS	Disease resistance protein signature	650	666	-	-
	Sto4g2457	965	Pfam	NB-ARC domain	201	450	IPR002182	GO:0043531
	Sto4g2457	965	Gene3D	-	27	139	-	-
	Sto4g2457	965	Gene3D	-	182	353	IPR027417	-
	Sto4g2457	965	CDD	RX-CC_like	30	154	IPR038005	-
	Sto4g2457	965	Gene3D	-	360	448	IPR042197	-
	Sto4g2457	965	Gene3D	Ribonuclease Inhibitor	571	924	IPR032675	-
	Sto4g2457	965	PANTHER	DISEASE RESISTANCE PROTEIN RP	53	920	IPR044974	GO:0006952
	Sto4g2457	965	Gene3D	-	449	540	IPR036388	-
	Sto4g2457	965	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	177	463	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto4g2457	Sto-Chr4	25950368	25954621	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto4g2457	191	424	WRKY Transcription Factor Family	AT4G12020	23.600	1.18e-07	54.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto4g2457	K13457		-	zju:107414247	985.326