Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2455 ATGGACGGCGGTGTGCTGCTGGTTGAAGACGATGGTGAGCCTGGAAGGGGCTATGGAtcgaaagagagagaagggcgaaaagaaaaggagaaacgATGGTGGTTTCACGGTGGCGTGAACAGAAAACGCCGAAGACTCACGGCTTCAGAGAAGAAATTGTCGAACCCAATGAGGGAAATCAAGGTTCAGAAGCTGGTTCTCAACATATCAGTCGGTGAGAGTGGAGATCGTCTTACCCGAGCTGCCAAGgtgtTGGAGCAACTTAGTGGCCAAACCCCTGTATTCTCCAAAGCAAGATACACTGTTCGTTCCTTTGGGATTAgaagaaatgaaaaaattgcATGCTATGTCACTGTTAGAGGTGACAAAGCAATGCAGCTTTTGGAGAGTGGCTTGAAGGTGAAGGAATATGAACTTCTGAGAAGAAACTTTAGCGACACAGGGTGTTTTGGCTTCGGTATTCAGGAGCATATCGATCTGGGAATCAAGTATGATCCTTCAACTGGCATTTACGGTATGGACTTCTTCGTCGTTCTGGAGCGCCCTGGTTATCGTGTTGGACGTCGTCGCAGGTGCAAGTCTCGTGTCGGTATTCAGCATCGTGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAAGGTGTGATCCTTAACAAGTCCCAAGCAATTGTTGGTTAG 687 0.441 MDGGVLLVEDDGEPGRGYGSKEREGRKEKEKRWWFHGGVNRKRRRLTASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIVG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2455 228 MobiDBLite consensus disorder prediction 14 29 - -
Sto4g2455 228 PANTHER 60S RIBOSOMAL PROTEIN L11-1 35 226 - -
Sto4g2455 228 Gene3D - 46 223 IPR022803 -
Sto4g2455 228 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 35 226 IPR002132 GO:0003735|GO:0005840|GO:0006412
Sto4g2455 228 SUPERFAMILY RL5-like 54 219 IPR022803 -
Sto4g2455 228 Pfam ribosomal L5P family C-terminus 112 210 IPR031309 -
Sto4g2455 228 Pfam Ribosomal protein L5 55 108 IPR031310 -
Sto4g2455 228 ProSitePatterns Ribosomal protein L5 signature. 85 101 IPR020929 GO:0003735|GO:0005840|GO:0006412
Sto4g2455 228 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2455 Sto-Chr4 25939031 25944170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2455 48 228 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 95.028 1.41e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2455 K02868 - gmx:100499863 340.502