Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2442 TTGGATGGTAATTTCCTGCAGAAAAAATGGAAGGACATTAGAGTTGGTGAAATCATTAAAATCCATGCCAATGAAACCATTCCTTGTGATATTGTGTTGTTGTCAACCAGTGATTCAACTGGTGTTGCATATGTTCAGACTATTAATTTAGATGGAGAGTCGAACTTAAAGACTCGGTATGCAAAACCAGAGACCCTTTCCAAGTTGCCTGAAAAGGAGACAATTAATGGGTTGATTAAGTGTGAGAAACCCAATAGGAACATATATGGGTTTCATGCTAGCATGGAAATTGATGAAAAGCGATTGTCACTTGGATCCTCCAATATTGTTCTACGAGGCTGTGAGCTTAAGAATACCAATTGGGCAATTGGTGTTGCTGTGTATTGTGGCCTTGAAACTAAAGCTATGCTCAATAGCTCAGGAGCTCCATCAAAGAGGAGCCGGCTGGAGACTCGAATGAATGTGGAGATCATCTTGATTTCTTGCTTTCTTGCAACTTTGTGCACAATTATTTCTGTTTGTACTGCTGTTTGGTTAAAGCTCCACAAAGATGAATTGGATTTCTTGCCGTATTATCGGAAACTGGACATTTcgaagggaaaagaaaaaagctATAAATATTTCGGATGGGGATTGGAAATACTGATTTCATTCCTCATGTCAGTTATAGTGTTCCAAGTTATGATCCCCATATCCTTGTACATTTCCATGGAGCTTGTCCGAGTTGGTCAGGCCTACTTCATGATTGGAGACACCGGAATGTATGATGAGGCATCAAATTCAAGATTCCAGTGCAGAGCTCTAAATATAAATGAAGATTTAGGTCAAATCAAATATGTTTTCTCTGACAAAACTGGCACACTTACTGAGAACAAGATGGATTTTCAATGTGCCAGCATCTGGGGGGTTGATTACAGTTCAGAAAAAGCCATTCCGGAAAATGAGCAAGTTCAATACTCTGTCCAAGTTGATGGAAAGGTCTTGAGGCCAAAGATGAAGGTAAAAGTTGATCCAAGGCTTTTGCAATTATCAAGATGTGGATTCAAAAATAAGGAGGGAAAACAGATTCGAGATTTTTTCCTAGTGTTGGCAGCCTGCAATACTATTGTGCCTCTTGTTGTTGATACATCTGATCCTACAGTCAAATTGATAGATTACCAAGGGGAGTCACCAGATGAACAAGCATTGGCATATGGTGCTGCTGCCTATGGTTTTACTCTTATAGAACGAACCTCGGGCTACATAGTTATTGATATTCAGGGAGAAAAACAGAGGTTCAATGTCTTGGGTTTGCACGAATTCGATAGTGACCGGAAGAGGATGTCTGTTATATTGGGGTACCCTGACAATTCTGTGAAAGTTTTTGTTAAAGGTGCAGATGCATCCATGTTTAGTGTGATAGATAAATTGTTGAACATGAATATAATACATGCAACTGAAACCCATCTTCACTCTTATTCCTCCACGGGTTTGAGGACGCTTGTTATTGGGATGCGGGAATTAAATGCTTCAGAATTTGAGCAATGGCACATTGCCTTTGAGGCAGCAAGCAATGCCTTAATTGGTAGGGCTGCCTTGCTTCGCAAGGTTTCTAGCAGTGTGGAAAAAGATCTCTGCATATTGGGTGCATCTGCTATTGAAGATAAGCTGCAGCAAGGGGTGCCAGAATCCATTGAGTCTTTAAGGATAGCAGGTATCAAGGTGTGGGTTTTGACTGGGGACAAGCAGGAAACCGCCATATCAATTGCTTACTCCTCAAAGCTCCTAACAGGCAATATGACTCAGATTATAATTAATAGCAACAGCAGAGAGTCATGTAGAAGGAGTTTAGAAGATGCCCTTGTAATGTCCAACAAACTCATGACCATGTCTGGGGCCACCAATGGTACTAGAGGGAGTATTGATGCCGTAACAGCTCCGATAGCGTTGATTATTGACGGTACCAGCCTCGTATATATTCTTGACAGTGAACTTGAAGAACAGCTCTTTCAACTAGCAAATAAATGTTCTGTGGTTCTCTGTTGTCGAGTGGCTCCATTGCAAAAGGCTGGAATTGTTTCCCTTGTGAAGAACAGAACGGCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGTATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCGTCTGATTTTGCAATGGGACAGTTTAGGTTTATAGTTCCTCTCTTATTGGTACATGGTCATTGGAATTATCAACGGCTGGCTTATATGGTACTATACAATCTTTACAGAAATGCTATCATTGTTCTTGTCCTATTTTGGTTTGTCCTATTCACTGCCTTCACTTTGACAACTGCAATAACTGAATGGAGCAGTCTGTTGTATTCAGTTGTTTACACTTCATTTCCAACTATTATTGTTGGTATTCTTGACAAGGATCTTAGTAAAAGGACTCTCCTAAAGTATCCCCAGCTTTATGGGGCTGGGCAGAGACATGAGGCCTACAACCAAAGTTTATTTTGGTTGACAATGGTTGATACTTTGTGGCAAAGCATTGTAGTGTTCTTTATTCCTCTCTTTGCATATTGGGGAAGCACCATTGATATTTCAAGCATAGGGGATCTTTGGACTCTTTCAgtggttattttggtaaatttaCATTTGGCCATGGATGTCATTAGGTGGACTTGGATTACTCATGCAGCCATCTGGGGGTCTGTTGTAGCCACTTTCATATCTGTCATGATCATTGATGCTATACCCTCATTTCATGGTTACTGGGCTATCTTTCATGCTTCAGGCACTTGGTTGTTCTGGTTATGTTTGCTTGGAATCATCATAGCAGCTTTGCTTCCTCGTTTTGTGGTAAAATTTGTCTGTCAATATTACTTTCCTGATGATATTCAAATTTCAAGAGAAGCAGAAAAAAAGCTAGCGGACACCAGAGTTATTGGAGGCGGGCAGATAGAAATGCTTCCTATTACAACAAATGGTCCACCTAGATAG 3012 0.4037 LDGNFLQKKWKDIRVGEIIKIHANETIPCDIVLLSTSDSTGVAYVQTINLDGESNLKTRYAKPETLSKLPEKETINGLIKCEKPNRNIYGFHASMEIDEKRLSLGSSNIVLRGCELKNTNWAIGVAVYCGLETKAMLNSSGAPSKRSRLETRMNVEIILISCFLATLCTIISVCTAVWLKLHKDELDFLPYYRKLDISKGKEKSYKYFGWGLEILISFLMSVIVFQVMIPISLYISMELVRVGQAYFMIGDTGMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMDFQCASIWGVDYSSEKAIPENEQVQYSVQVDGKVLRPKMKVKVDPRLLQLSRCGFKNKEGKQIRDFFLVLAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALAYGAAAYGFTLIERTSGYIVIDIQGEKQRFNVLGLHEFDSDRKRMSVILGYPDNSVKVFVKGADASMFSVIDKLLNMNIIHATETHLHSYSSTGLRTLVIGMRELNASEFEQWHIAFEAASNALIGRAALLRKVSSSVEKDLCILGASAIEDKLQQGVPESIESLRIAGIKVWVLTGDKQETAISIAYSSKLLTGNMTQIIINSNSRESCRRSLEDALVMSNKLMTMSGATNGTRGSIDAVTAPIALIIDGTSLVYILDSELEEQLFQLANKCSVVLCCRVAPLQKAGIVSLVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFIVPLLLVHGHWNYQRLAYMVLYNLYRNAIIVLVLFWFVLFTAFTLTTAITEWSSLLYSVVYTSFPTIIVGILDKDLSKRTLLKYPQLYGAGQRHEAYNQSLFWLTMVDTLWQSIVVFFIPLFAYWGSTIDISSIGDLWTLSVVILVNLHLAMDVIRWTWITHAAIWGSVVATFISVMIIDAIPSFHGYWAIFHASGTWLFWLCLLGIIIAALLPRFVVKFVCQYYFPDDIQISREAEKKLADTRVIGGGQIEMLPITTNGPPR 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2442 1003 Gene3D - 1 138 - -
Sto4g2442 1003 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 671 787 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto4g2442 1003 Gene3D - 384 520 IPR023299 GO:0000166
Sto4g2442 1003 Pfam Cation transport ATPase (P-type) 390 464 - -
Sto4g2442 1003 CDD P-type_ATPase_APLT_Dnf-like 2 860 - -
Sto4g2442 1003 SFLD Haloacid Dehalogenase 265 751 - -
Sto4g2442 1003 PRINTS Sodium/potassium-transporting ATPase signature 777 797 - -
Sto4g2442 1003 PRINTS Sodium/potassium-transporting ATPase signature 274 295 - -
Sto4g2442 1003 Gene3D - 537 740 IPR023214 -
Sto4g2442 1003 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 3 999 - -
Sto4g2442 1003 SUPERFAMILY HAD-like 276 755 IPR036412 -
Sto4g2442 1003 SFLD p-type atpase 265 751 IPR044492 -
Sto4g2442 1003 SUPERFAMILY Calcium ATPase, transmembrane domain M 134 967 IPR023298 -
Sto4g2442 1003 Pfam Phospholipid-translocating P-type ATPase C-terminal 728 967 IPR032630 -
Sto4g2442 1003 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 4 974 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Sto4g2442 1003 ProSitePatterns E1-E2 ATPases phosphorylation site. 283 289 IPR018303 -
Sto4g2442 1003 PRINTS P-type cation-transporting ATPase superfamily signature 700 719 - -
Sto4g2442 1003 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Sto4g2442 1003 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 287 553 IPR023299 GO:0000166
Sto4g2442 1003 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 3 999 - -
Sto4g2442 1003 SUPERFAMILY Calcium ATPase, transduction domain A 2 135 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2442 Sto-Chr4 25827636 25832344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2442 2 1003 Primary Pumps ATPases AT5G04930 69.453 0.0 1466