Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2441 ATGGTCTTaaGGTGCTTAGACCCACAAAGTTTCAGAGAATTCAAGCTTGTGAAGAAAACAGAAATCAGCCACAATTCTGCAAGATTTAGATTTGCACTTCCAAAACCTTCTTCAGTATTGGGTCTTCCTGTTGGGAAACACATACAATGCAGAGGGAAAGATAGCCAAGGAGAGGAAGTCATCAGATCATATACTCCAATCACTTTGGATTCAGATGTTGGCTACTTTGAATTGGTTATTAagATGTACCCAAAGGGAAGGATGTCCCACCATTTTAGAGAGATGAGGGTTGGTGATTTCTTACCTGTGAGAGGTCCCaagTTAAAGATTAATATTAGGCTTCATACAGGGCGTTTTAGTTATAAACCTGGCCAAGCTGGGGCCTATGGAATGATAGCTGGAGGTACGGGCATTACTCCAATGTTTCAGCTGATTAGAGCCATACTAGAAAATCCTAAAGACAAGACAAAATTGAATCTAATATATGCCAATGTCACATTGGATGACATTCTCTTGAAGAAAGAACTAGATGAGTTTGCAGACAAGTTTGCGGGACGTTTAAAAGTGTTTTATGTTCTAAATCAGCCTCCTCAACAATGGAATGGTGGGGTTGGGTTTGTATCAAAGGAAATGATTCAAACCCATTGTCCTGCACCTGCCCCAGATATCCAGATACTAAGGTGTGGTCCACCAAGCATGAATAAAGCTGTGGCTACTCACCTTGATGCACTTGGCTACACACCAAACATGCAGTTCGAGTTCTga 765 0.4092 MVLRCLDPQSFREFKLVKKTEISHNSARFRFALPKPSSVLGLPVGKHIQCRGKDSQGEEVIRSYTPITLDSDVGYFELVIKMYPKGRMSHHFREMRVGDFLPVRGPKLKINIRLHTGRFSYKPGQAGAYGMIAGGTGITPMFQLIRAILENPKDKTKLNLIYANVTLDDILLKKELDEFADKFAGRLKVFYVLNQPPQQWNGGVGFVSKEMIQTHCPAPAPDIQILRCGPPSMNKAVATHLDALGYTPNMQFEF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2441 254 Gene3D Translation factors 4 106 - -
Sto4g2441 254 CDD cyt_b5_reduct_like 14 254 - -
Sto4g2441 254 PANTHER NADH-CYTOCHROME B5 REDUCTASE 4 254 IPR001834 GO:0016491
Sto4g2441 254 Pfam Oxidoreductase FAD-binding domain 14 110 IPR008333 -
Sto4g2441 254 Gene3D - 110 254 IPR039261 -
Sto4g2441 254 SUPERFAMILY Riboflavin synthase domain-like 4 109 IPR017938 -
Sto4g2441 254 Pfam Oxidoreductase NAD-binding domain 131 238 IPR001433 GO:0016491
Sto4g2441 254 PANTHER NADH-CYTOCHROME B5 REDUCTASE 4 254 - -
Sto4g2441 254 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 130 149 IPR001709 GO:0016491
Sto4g2441 254 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 168 179 IPR001709 GO:0016491
Sto4g2441 254 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 224 232 IPR001709 GO:0016491
Sto4g2441 254 PRINTS Cytochrome B5 reductase signature 40 51 - -
Sto4g2441 254 PRINTS Cytochrome B5 reductase signature 62 69 - -
Sto4g2441 254 PRINTS Cytochrome B5 reductase signature 98 112 - -
Sto4g2441 254 PRINTS Cytochrome B5 reductase signature 130 149 - -
Sto4g2441 254 PRINTS Cytochrome B5 reductase signature 168 179 - -
Sto4g2441 254 PRINTS Cytochrome B5 reductase signature 224 232 - -
Sto4g2441 254 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 9 113 IPR017927 GO:0016491
Sto4g2441 254 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 116 249 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2441 Sto-Chr4 25813145 25818711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2441 5 254 NADPH P450 reductases AT5G17770 70.400 3.42e-134 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2441 K00326 - gmx:100809584 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2441 4 25813145 25818711 Sto4g2441 4 25813145 25818711 ECH