Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2431 ATGCACAAAGTCTCACAAGCTTTAAGAAtctcctccttctcttcctCATCCTCATTCAATTCAAAGACGACCATGGGAAGGAAAGAAGAATCCAGAAGATCACTATCAGACGAATACGAAATTTCAGAGATCTTAGGAAGAGGAGGATTCTCCGTCGTCAGAAAAGCCACCAAGAAGAAATCGACCACCGCCGGTACTAACGGCGACGGCGGCGACGGCGCCGTCATCGAGGAGAAGAAAACGCAGGTGGCGATCAAAACGCTGAGAAGATTAGGTAATTTCAACAATCCTTCGGCTTCCGCTTCGTGGAGGCAGCAAATTTCGATATCGGAAGCGTTGCTGACGAACGAGATTCTGGTGATGAGGAAGATCGTTGAAGCGATTTCTCCTCATCCGAACGTGATTGACCTCTACGATGTTTACGATGACTCCAACGGCGTTCATCTCGTGCTCGAGCTCTGTTCTGGAGGCGAACTGTTCGATCGGATTGTGGCACAAGACAGTATTCAGGTGAGCATATTAGAATTGCAAACTTTTTTGGGATTCAAATTGGGGGTTTGGGAAATAAACATATATGTTTTGAATCCTATTGATcattgcatcatcatcatcatcaggtaCTCAGAGGCTGAAGCAGCATTTGTGGTTCGTCAGATTGCAAGTGGGTTAGAGGCTCTTCATGCAGCCAATATAGTTCACAGAGACTTGAAGCCTGAGAATTGCTTGTTTCTAGACAAAACCCAGAATTCTCCTCTCAAGATTATGGACTTTGGGTTGAGTTCTGTGGAAGAATTTACTGACCCCATTGTGGGTTTGTTTGGATCCATTGATTACGTCTCACCAGAAGCTCTTTCCCAAGCCAAAATTACCACCAAGACTGACATGTGGTCTCTTGGTGTCATTTTATACATCTTGCTTTCTGGGTATCCACCTTTCATTGCACAGAATAATCGCCAAAAGCAACAAATGATAATGAATGGGAACTTCAGTTTCTATGAGAAGACATGGAAGGGCATTTCCTCATCAGCAAAGCAATTGATTTCAAGCCTTCTCACTGTTGATCCTCATAGGAGACCTAGTGCTCAAGAGCTTGTAAATCATCCATGGGTGAGAGGAGACATAGCAAAAGATGATCAAATAGACCCAGAGATTGTTTCAAGATTGCAGAATTTCAATGCAAGACGCAAACTTCGAGCAGCTGCAATTGCTAGTGTATGGAGCACCACTGTGTTCTTGAGGACCAAGAAACTCAGATCCTTGCTGGGATCCCACCACGATCTTACAcaacaagaaattcaaaatctcAGCGTTCATTTCAAGAAGATATGTGCAAATGGAGACAATGCCACTCTGTCTGAATTTGAGGAGGTGCTAAAAGCAATGAACATGCCTTCCCTTGTCCCTCTGGCACCTCGTATCTTCGACCTATTTGACAACAATCGTGATGGTACTATTGACATGCGAGAGATTCTGTGTGGCTTCTCCAGCCTCAAGAATCCTAAAGGTGATGATGCTCTTCGCTTGTGCTTCCagATGTATGATACAGATCGATCTGGGTGCATCTCTAAGGAAGAAGTAGCATCAATGCTCAGAGCTCTACCAGAAGATTGCCTTCCGGTTGATATCACTGAACCTGGTAAATTAGATGAGATATTTGATGTGATGGATGCTAATAGTGATGGAAAAGTTACTTTTGAGGAGTTCAAAGCTGCTATGCAAAGGGATAGTTCTCTCCAAGACGTTGTCCTCTCTACTCTTCGCCCACTATAA 1770 0.4249 MHKVSQALRISSFSSSSSFNSKTTMGRKEESRRSLSDEYEISEILGRGGFSVVRKATKKKSTTAGTNGDGGDGAVIEEKKTQVAIKTLRRLGNFNNPSASASWRQQISISEALLTNEILVMRKIVEAISPHPNVIDLYDVYDDSNGVHLVLELCSGGELFDRIVAQDSIQVSILELQTFLGFKLGVWEINIYVLNPIDHCIIIIIRYSEAEAAFVVRQIASGLEALHAANIVHRDLKPENCLFLDKTQNSPLKIMDFGLSSVEEFTDPIVGLFGSIDYVSPEALSQAKITTKTDMWSLGVILYILLSGYPPFIAQNNRQKQQMIMNGNFSFYEKTWKGISSSAKQLISSLLTVDPHRRPSAQELVNHPWVRGDIAKDDQIDPEIVSRLQNFNARRKLRAAAIASVWSTTVFLRTKKLRSLLGSHHDLTQQEIQNLSVHFKKICANGDNATLSEFEEVLKAMNMPSLVPLAPRIFDLFDNNRDGTIDMREILCGFSSLKNPKGDDALRLCFQMYDTDRSGCISKEEVASMLRALPEDCLPVDITEPGKLDEIFDVMDANSDGKVTFEEFKAAMQRDSSLQDVVLSTLRPL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2431 589 Pfam EF hand 474 489 IPR002048 GO:0005509
Sto4g2431 589 ProSiteProfiles Protein kinase domain profile. 39 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2431 589 ProSitePatterns EF-hand calcium-binding domain. 556 568 IPR018247 -
Sto4g2431 589 SMART serkin_6 39 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2431 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 573 - -
Sto4g2431 589 Gene3D Transferase(Phosphotransferase) domain 1 204 408 - -
Sto4g2431 589 SUPERFAMILY EF-hand 420 580 IPR011992 -
Sto4g2431 589 Pfam EF-hand domain pair 504 573 IPR002048 GO:0005509
Sto4g2431 589 CDD EFh 472 531 IPR002048 GO:0005509
Sto4g2431 589 ProSiteProfiles EF-hand calcium-binding domain profile. 472 500 IPR002048 GO:0005509
Sto4g2431 589 SMART efh_1 505 533 IPR002048 GO:0005509
Sto4g2431 589 SMART efh_1 547 575 IPR002048 GO:0005509
Sto4g2431 589 SMART efh_1 469 497 IPR002048 GO:0005509
Sto4g2431 589 CDD EFh 506 573 IPR002048 GO:0005509
Sto4g2431 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Sto4g2431 589 ProSitePatterns EF-hand calcium-binding domain. 478 490 IPR018247 -
Sto4g2431 589 SUPERFAMILY Protein kinase-like (PK-like) 33 397 IPR011009 -
Sto4g2431 589 Gene3D Phosphorylase Kinase; domain 1 34 64 - -
Sto4g2431 589 Gene3D - 413 582 - -
Sto4g2431 589 ProSiteProfiles EF-hand calcium-binding domain profile. 501 536 IPR002048 GO:0005509
Sto4g2431 589 ProSitePatterns EF-hand calcium-binding domain. 514 526 IPR018247 -
Sto4g2431 589 CDD STKc_CAMK 39 369 - -
Sto4g2431 589 Pfam Protein kinase domain 206 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2431 589 Gene3D Phosphorylase Kinase; domain 1 73 162 - -
Sto4g2431 589 PANTHER CALCIUM AND CALCIUM/CALMODULIN-DEPENDENT SERINE/THREONINE-PROTEIN KINASE 29 573 - -
Sto4g2431 589 ProSiteProfiles EF-hand calcium-binding domain profile. 543 578 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2431 Sto-Chr4 25756137 25765359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2431 25 574 EF-hand Containing Proteins AT4G23650 31.239 8.14e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Sto4g2431 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2431 K13412 - gmx:732616 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2431 4 25756137 25765359 Sto4g2431 4 25756137 25765359 ECH