Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2429 ATGCGCATCCAAACAATGGGGTCTCAAAGTGGTGATGATGGTAATGGAAATCAATTACAATTCCAGCCTCAAGTGAGGCAAAACTCCATGTACAGTCTCACCCTTGACGAGGTTCAGTATCAACTAGGTGACTTAGGGAAGCCACTTTGTAGTATGAACCTTGATGAGCTTCTAAAGAATGTATGTACTGCCGAGGCAAATCAATCTATAGGTATGGACATTGAGGGCACAGCACAAACTAGTCAAACTGCTATGCAGAATCAGGCTTGTCTATTCCTAACTAGTGCACTGAGCAAGAAAACGGTTGATGAGGTCTGGAGAGATATCCTACAAAGCAAAAATAGTGAGGGGAAGAAGTCTCGAGATAGGCAGCCTACTTTAGGTGAGATGACATTGGAGGACTTCCTGGTAAAAGCTGGCATTGCTGCAGACTCATCTTCTGATGGTAAGAAAACTGGGCCACTTGTTGAGTTTGATTCAAATATAGCAGCACCACATTTTCCTTGGCAAGGTCAGTGGATTCCGCATCCACAAACACAATACCAGCATCCAGAACAAAACTTGATGAGTATATACATGCCTGGTCAGAGTATAGCACAGCCGTTACACTTGGGTGTAGGTGCTACATTGGATGTTCCTCTTGGTGATTATCAGGTGGCAGTACCTTCTCCGTTGATGGGAACTTTGTCTGATACACAGACACctggaagaaaaagaggaactcCAGAGGGCATGATAGGGAAAACTGTTGAGAGGAAGCAGAAAAGGATGATCAAGAATCGCGAATCTGCTGCTCGTTCAAGAGCTAGGAAACAGGCTTACACACATGAATTGGAGAACAAAGTCGCGAATCtggaagaggaaaatgagagacTGAGGAAAGAGAAGGAACTAGAGAATATGTTGCTGCGTGCACTGCCTCCTGAGCCTAAGTTGACACATGCATTTTCTGATCTTCTAGGAATAGCAATGCCAATTAGATGCTTTTGCTTCCaatgTGCTGGCAATGAGCTAGATTCATCTGACAACTCAGGAAAGTTTCTAATGAATGACTCTGGATCAGAATAA 1068 0.4204 MRIQTMGSQSGDDGNGNQLQFQPQVRQNSMYSLTLDEVQYQLGDLGKPLCSMNLDELLKNVCTAEANQSIGMDIEGTAQTSQTAMQNQACLFLTSALSKKTVDEVWRDILQSKNSEGKKSRDRQPTLGEMTLEDFLVKAGIAADSSSDGKKTGPLVEFDSNIAAPHFPWQGQWIPHPQTQYQHPEQNLMSIYMPGQSIAQPLHLGVGATLDVPLGDYQVAVPSPLMGTLSDTQTPGRKRGTPEGMIGKTVERKQKRMIKNRESAARSRARKQAYTHELENKVANLEEENERLRKEKELENMLLRALPPEPKLTHAFSDLLGIAMPIRCFCFQCAGNELDSSDNSGKFLMNDSGSE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2429 355 CDD bZIP_plant_BZIP46 252 306 - -
Sto4g2429 355 Pfam bZIP transcription factor 252 297 IPR004827 GO:0003700|GO:0006355
Sto4g2429 355 Gene3D - 250 304 - -
Sto4g2429 355 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Sto4g2429 355 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 305 IPR043452 GO:0003700|GO:0045893
Sto4g2429 355 MobiDBLite consensus disorder prediction 1 20 - -
Sto4g2429 355 SUPERFAMILY Leucine zipper domain 252 298 IPR046347 GO:0003700|GO:0006355
Sto4g2429 355 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 295 IPR004827 GO:0003700|GO:0006355
Sto4g2429 355 PANTHER BZIP TRANSCRIPTION FACTOR 4 305 - -
Sto4g2429 355 Coils Coil 268 305 - -
Sto4g2429 355 MobiDBLite consensus disorder prediction 253 272 - -
Sto4g2429 355 SMART brlzneu 248 309 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2429 Sto-Chr4 25695080 25701257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2429 26 311 bZIP Transcription Factor Family AT3G56850 51.890 1.33e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto4g2429 bZIP_1 6.8e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2429 K14432 - qsu:111991766 426.402