Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2415 ttgtcaGATGaggcaaaaagaaagaaattagatTGGAAACAAAGACTACACATTATTAATGGAATTGCTAGAGGACTTCTATACCTTCATGAGGATTCTCGTCTTCGAGTAATCCATAGGGATCTAAAAGCTAGCAATGTCCTTCTGGACCATGAGATGAACCCTAAAATATCAGATTTTGGATTGGCAAAGACTTTCGAAGGTGGCGAGAGCCAAGGAAATACTAAAAGAGTAATGGGAACTTAG 246 0.3496 LSDEAKRKKLDWKQRLHIINGIARGLLYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLAKTFEGGESQGNTKRVMGT 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2415 81 PANTHER PROTEIN KINASE DOMAIN 2 81 - -
Sto4g2415 81 Gene3D Transferase(Phosphotransferase) domain 1 1 81 - -
Sto4g2415 81 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 81 - -
Sto4g2415 81 SUPERFAMILY Protein kinase-like (PK-like) 3 81 IPR011009 -
Sto4g2415 81 ProSiteProfiles Protein kinase domain profile. 1 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2415 81 Pfam Protein kinase domain 7 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2415 81 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2415 Sto-Chr4 25550551 25550796 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2415 3 81 Receptor kinase-like Gene Family AT4G04500 65.823 1.01e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto4g2415 Pkinase 2.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2415 - - vun:114170171 135.576