Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2405 ATGGTTGTGGCCGTGGTAGGGAAGGAGGAGGTTGTTGTGGCTAATTCTGTTATTCCTCACATACTAGCTCAGAACACAAGCAGTGTAGTGGACACACAGCCTCTTGATTATCGCTATGCTTGTTTGGACCAAAGTGGCATAAAAACTTCAGACAAGTACCAAACCAACCTCAATAGTCTCCTGTCTTCATTCATTTCTGATTCTTCAACCAGCAATGGCTTTGGCAATAGAAGTTTAGGTAGTAGTGATGATTATGATAGAAGCAATAGTATGGTGTATGGTCTTTACCTTTGCAGAGGAGATGTTAATAGCAGCATTTGCCATTCTTGTGTCCAAAACTGTAGCAATTTGATCCAACAACACTGCCCCAACAATGCTTCTGCTGTTTTGTGGTACCCATTTTGTGTTCTCAGATACTCAAACCAATATTTCTTTGGCAATCTGACAATGACACCGAGGATTCCGATGTTCGATGTGACACAGAACTTCACAAGTGCAGGGGAGTTTGACAGTGATGCTAGGATTCTGATGAATGGTTTGATACAGACAGGATCAGAGGCAGAATTAATGTTTGGGACACACATGTTTAACATTAATGGCACCCAGAAGAGGTATGGTTGGGTGCAGTGTACCAGAGACATTACCAGTGAAGAATGTAGGACATGTCTGAGCAATATGCTTGAAGATGTTGAGGATTGCTGTGAGGGGAAGAGGGTTTGGAGAATTTTCTCTCCTAGTTGTGTTGTCATGTATGAGACTCAACCTTTCTTTGTGGATGGCACAGGGACAATTGCACCAACATCCCAACCAGGGGAAGAAAGTAGTAACAGAAGGTCAATGCTTATAGCTATAGTTGTTGTGAGTGCAGTATTAGTACTAGCTCTTCTGACTTTCTGCACAGTTTACTTCAGGTGCCTCAAAAGGAAAAAGGAAGATGGGCTAAATAAAGTATTTTCTGAAGATCAAGAAGGGGAGGATTCTATGAATGCTGACCTTCCTATGATGCCTCTGAGTACTATCCTACaaactacttATACAGAGAAGCGTTTGAAGCTGGAATGGAAACTGAGATTAAGCATCATTAATGGGATAGCTAAAGGGCTTCTGTATCTTCATGAAGACTCTAGACTCAGAGTTATTCACAGAGACCTAAAAGCTAGCAATATCTTATTGGACCATGAAATGAATCCAAAAATCTCAGACTTTGGATGGCAAGAATTTTTTGGAGAAGATGTGAAGCAAGCAAATAACAGTCAGAGGTTGTGGgGATACATGGCTCCTGAGTATGCTATGGAAGGTTTTATTTTCAGTGAAGTCTGA 1320 0.4106 MVVAVVGKEEVVVANSVIPHILAQNTSSVVDTQPLDYRYACLDQSGIKTSDKYQTNLNSLLSSFISDSSTSNGFGNRSLGSSDDYDRSNSMVYGLYLCRGDVNSSICHSCVQNCSNLIQQHCPNNASAVLWYPFCVLRYSNQYFFGNLTMTPRIPMFDVTQNFTSAGEFDSDARILMNGLIQTGSEAELMFGTHMFNINGTQKRYGWVQCTRDITSEECRTCLSNMLEDVEDCCEGKRVWRIFSPSCVVMYETQPFFVDGTGTIAPTSQPGEESSNRRSMLIAIVVVSAVLVLALLTFCTVYFRCLKRKKEDGLNKVFSEDQEGEDSMNADLPMMPLSTILQTTYTEKRLKLEWKLRLSIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGWQEFFGEDVKQANNSQRLWGYMAPEYAMEGFIFSEV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2405 439 Gene3D Transferase(Phosphotransferase) domain 1 326 437 - -
Sto4g2405 439 Pfam Protein kinase domain 343 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2405 439 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 347 434 - -
Sto4g2405 439 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 29 344 - -
Sto4g2405 439 Pfam Salt stress response/antifungal 161 253 IPR002902 -
Sto4g2405 439 Pfam Salt stress response/antifungal 47 142 IPR002902 -
Sto4g2405 439 Gene3D - 35 144 IPR038408 -
Sto4g2405 439 Gene3D - 156 256 IPR038408 -
Sto4g2405 439 ProSiteProfiles Gnk2-homologous domain profile. 35 144 IPR002902 -
Sto4g2405 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Sto4g2405 439 ProSiteProfiles Gnk2-homologous domain profile. 151 256 IPR002902 -
Sto4g2405 439 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 347 434 - -
Sto4g2405 439 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 344 - -
Sto4g2405 439 ProSiteProfiles Protein kinase domain profile. 253 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2405 439 SUPERFAMILY Protein kinase-like (PK-like) 335 433 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2405 Sto-Chr4 25459309 25471244 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2405 34 433 Receptor kinase-like Gene Family AT4G23280 34.205 4.81e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto4g2405 Pkinase 9.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2405 - - gmx:100798691 458.373