Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2401 ATGAGGAAGAAGCTCGACACGCGTTTCCCGGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAAGATATTGGGAAAATAGCTCTGGCTGTGCCTGTTTTAGTTTCAAAAGCTTTAGAGCTATTTTTGCAAGATCTTTGTGACCATACGTATGATATAACTCTCCGGAGAGGAGCAAAGACCATGAGTGCATTGCATTTAAAGCATTGTGTTCAAAGCTATAATGTCTTTGATTTTCTGAGGGATATTGTCAGCAGGGTTCCTGACTATGGTCATGGCCATGGTCACGGCCATTCTGACTCTGGTGCTGATGATCGGGTTGTTTCAAAGAGAAGGTTGAAAGCAGCAGGTGATAATTGCAATGACAGTGATGAGGAGTCTAAGAGGAGCAAGATGCATGAGGTGAGCCACACTGGAAGTACCGGTAGAGGaagaggtcgaggtagaggaaGAGGTCGTGGACGAGGGGCTCGAACTGTAGAGAGAGAGGCTCATCATCAGGAGGCTGAACCTGAGCCTAGCACTTTTGTTCAGCACAGCAGCGAACATAATCCTAGCACAAGTATGGTAGTAGATAATGTTTCAGAGCCAAAGGAGTCACCAAAGGAGAGTATTACAGTTCCTGTTGAAGGCATTCAGACTGTCAATAACATAGATCTGAATGCCAATACGAATGAAAGTGAAGACAAAAATGCTAGCTCAGCAGCTCAAGCTTCATTGCCTGAACCTGAAACTGAGACCAAGCATGAAGAAATCCCAGGCTGGTCTATTTCTGACGCGGACAAGATGGCCATCGATTCTCTGCAGCTTGCACAGCTGGGTAGATTAGACGAAGAAGAGGAAGATTATGATGAGGAAGGGTAA 864 0.4433 MRKKLDTRFPAARIKKIMQADEDIGKIALAVPVLVSKALELFLQDLCDHTYDITLRRGAKTMSALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHGHGHSDSGADDRVVSKRRLKAAGDNCNDSDEESKRSKMHEVSHTGSTGRGRGRGRGRGRGRGARTVEREAHHQEAEPEPSTFVQHSSEHNPSTSMVVDNVSEPKESPKESITVPVEGIQTVNNIDLNANTNESEDKNASSAAQASLPEPETETKHEEIPGWSISDADKMAIDSLQLAQLGRLDEEEEDYDEEG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2401 287 PANTHER HISTONE SUPERFAMILY PROTEIN 1 286 - -
Sto4g2401 287 MobiDBLite consensus disorder prediction 114 205 - -
Sto4g2401 287 MobiDBLite consensus disorder prediction 114 140 - -
Sto4g2401 287 SUPERFAMILY Histone-fold 4 90 IPR009072 GO:0046982
Sto4g2401 287 MobiDBLite consensus disorder prediction 223 241 - -
Sto4g2401 287 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Sto4g2401 287 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 286 - -
Sto4g2401 287 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Sto4g2401 287 MobiDBLite consensus disorder prediction 173 194 - -
Sto4g2401 287 MobiDBLite consensus disorder prediction 223 258 - -
Sto4g2401 287 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2401 Sto-Chr4 25435686 25438438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2401 1 275 CCAAT-HAP5 Transcription Factor Family AT3G12480 54.138 9.23e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sto4g2401 CBFD_NFYB_HMF 2.2e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2401 K21752 - gmx:100814712 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2401 4 25435686 25438438 Sto4g2401 4 25435686 25438438 ECH