Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2368 ATGAATAGGTGCCACGCCCGGATCCATTCTGCAACTATAAATTTTGGTATAGAGTATAAGCTCTTTGACATTATTGCTAAGGCAAATGGGAGACACGTGTCAGCCGTTGAAGTCGCTTCTCAGCTTCCAAGTTCATTGCAACACCAAGACTTGGCTTTCAGGTTGGATCGTGTCTTAAGGCTTCTTGCTACGCAATCTCTTCTTACTTGTTCCTACGGCGTCAATAGTGGTGACGACACTCAAAGAGAGAGGCTCTATGGAATTTCTCCCATTGGAAAATTCTTTGTGAGTGCTAATGAAAACACTAGTGGATCGGTGGCTTTGAGCTCAACATTCATGGCTTATCCAGCAATTGTGTATGCTTGgcTTAATTTTAAGAATACAATAATAGACAAAGACACTGATGACCTACACAAGAAAGTTCATGGAATGTCCGCGTACCAATACACAAAGATAGACCCAATATGGAATAACTTGTTCAACAAAGGAATGGAAAATCTTAGCTTTATAATGATGACAAGGATACTCGAAATATACAAAGGATTTGAGGGAATTTCAACACTTGTGGATGTGGGAGGTGGCACAGGTCAAACCCTAAAAATGATACTCTCTAAGTATCCTTCTATTAAGgctattaattttgatttgccTACTGTCATTCAAAATGCACCACCCCATCCagGGATAGAGCATGTGGAAGGAGATATGTTTGCAAGTATTCCTAAAGGTGATGCTATAATATTGAAGAATATATGCCATAATTGGTCAGATGAAAGTTGCATAAAAATTCTGAGTGAATGCTACAAAGCATTGCCAGAAAATGGGAAGGTGATTGTTTTAGATGTCATAATGGGAGAAGAGGTTGAGGAATCAGAAGAAGCCAAGCTTGCTTCCACACTTGACATCATCATGTTTGCTTATGGTGGCAGAGAAAGAAGTGagaaagagtttgagtcttTGTGCAAACGTTCTGGATTTTCTGGCATCAAACTTGCTTGCCGTGCCTACCATCAAGGAATTGTGGaattttacaaataa 1038 0.3815 MNRCHARIHSATINFGIEYKLFDIIAKANGRHVSAVEVASQLPSSLQHQDLAFRLDRVLRLLATQSLLTCSYGVNSGDDTQRERLYGISPIGKFFVSANENTSGSVALSSTFMAYPAIVYAWLNFKNTIIDKDTDDLHKKVHGMSAYQYTKIDPIWNNLFNKGMENLSFIMMTRILEIYKGFEGISTLVDVGGGTGQTLKMILSKYPSIKAINFDLPTVIQNAPPHPGIEHVEGDMFASIPKGDAIILKNICHNWSDESCIKILSECYKALPENGKVIVLDVIMGEEVEESEEAKLASTLDIIMFAYGGRERSEKEFESLCKRSGFSGIKLACRAYHQGIVEFYK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2368 345 SUPERFAMILY "Winged helix" DNA-binding domain 2 99 IPR036390 -
Sto4g2368 345 Pfam Dimerisation domain 17 63 IPR012967 GO:0046983
Sto4g2368 345 PANTHER O-METHYLTRANSFERASE 6 345 IPR016461 GO:0008168
Sto4g2368 345 Gene3D Vaccinia Virus protein VP39 157 335 IPR029063 -
Sto4g2368 345 Gene3D - 10 175 IPR036388 -
Sto4g2368 345 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 345 IPR016461 GO:0008168
Sto4g2368 345 Pfam O-methyltransferase domain 122 327 IPR001077 GO:0008171
Sto4g2368 345 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 343 IPR029063 -
Sto4g2368 345 PIRSF O-mtase 1 345 IPR016461 GO:0008168
Sto4g2368 345 CDD AdoMet_MTases 187 284 - -
Sto4g2368 345 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2368 Sto-Chr4 25052052 25054163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2368 1 345 Monolignol Biosynthesis Gene Families AT5G54160 46.974 2.76e-107 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2368 - - gmx:100784030 373.629