Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2347 ATGGAGGCTAAACGCCGAACGGTTCGCTCCCTCGTGGCGAAACTAAGCTCCGTCGTAGAGAAAACCCGCGTCGATGCTCTCTGTGAGCTTCGCCTCATGACCAAGCAAGAACCAGAGATCCGACCTCTGATCGCCGATTCCGACGCCGTTCCTTACTTGGCAGAAACCCTCTATTCCTCCTCCCACGATTCCCAAGACAACGCCGCCGCCACGCTTCTCAACCTCTCCATCTCCTGCAAGGACTCTCTCGTCTCCACGCGCGGCGTCCTCGACGCCATCTCCCACCTCCTCTCCCACCACCGATCCACCTCCTCTCCCTCCGCCGTCCAATCCGCCGCCGCCACGTTGCACAGCCTCCTCGTCGTCGACGACTACCGGCCTATCATCGGATCCAAGCGCGATATTGTCTACGCGCTGGTGGACATAATCAGGAGCCTGAACTCGCCTTCGAGGTCCATCAAGGACGCGCTCAAGGCCCTGTTCGGGATCTCGCTCTATCCGCTGAATCGGGGCACGGTGATCCACCTCGGCGCGGTGCCGCCGCTGTTCTCGCTGGTGGTGAAGGACGGGAGGGTGGGGATCGTGGAGGACGCGACGGCGGTGATCGCGCAGATCGCCGGGTGCGAGGAGAGCGAGGAGGCGTTCCGGAAGGTGTCCGGGATCGGGGTCCTGGTGGATCTGATGGACTGCGCGACGGGGACGAGCATGAGGACGAAGGAGAATGCGGTGTCGGGGTTGTTGAATGTGGTGAGGTGCGGAGGGGAGAGAGTGGCGGCGGATGTGAGGGAGAGATCGGGGGTGCGGGCGATGGAGGGGGTTGCTGACGTGGCGGAGAACGGAAGCGCCAAGGGAAAGGGCAAGGCGGCGGCGCTGTTGAAGGTGATGGTGCTCGACGGCGGCGGGAATGGCGATGTAGTGAGGGATAGGCGGCGGTTTGAATTTGATTCCTTGGTTGTTGAAGCTTCTTCATGA 972 0.6224 MEAKRRTVRSLVAKLSSVVEKTRVDALCELRLMTKQEPEIRPLIADSDAVPYLAETLYSSSHDSQDNAAATLLNLSISCKDSLVSTRGVLDAISHLLSHHRSTSSPSAVQSAAATLHSLLVVDDYRPIIGSKRDIVYALVDIIRSLNSPSRSIKDALKALFGISLYPLNRGTVIHLGAVPPLFSLVVKDGRVGIVEDATAVIAQIAGCEESEEAFRKVSGIGVLVDLMDCATGTSMRTKENAVSGLLNVVRCGGERVAADVRERSGVRAMEGVADVAENGSAKGKGKAAALLKVMVLDGGGNGDVVRDRRRFEFDSLVVEASS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2347 323 SMART arm_5 37 77 IPR000225 GO:0005515
Sto4g2347 323 SMART arm_5 208 251 IPR000225 GO:0005515
Sto4g2347 323 SMART arm_5 166 207 IPR000225 GO:0005515
Sto4g2347 323 PANTHER U BOX DOMAIN-CONTAINING 2 310 - -
Sto4g2347 323 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 310 - -
Sto4g2347 323 SUPERFAMILY ARM repeat 7 258 IPR016024 -
Sto4g2347 323 Gene3D - 1 295 IPR011989 -
Sto4g2347 323 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 177 220 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2347 Sto-Chr4 24863317 24864288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2347 8 302 U-box Gene Family AT2G23140 32.095 1.60e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2347 - - rcu:8260761 406.757