Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2329 ATGGCTGCAGAAACTCAGTTTCAATTTCATGTTTTGGCTGTTGATGATAGTCTAATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCATCATTTCAAGTTACTGCAGTGGATTCTGGTAGCAAGGCTTTGAAATTGCTTGGTTTGAATGAAGATGAGCAGAGGAATGCAGACACCTTCTCTGTTGCTTCAGATACTCATCAGGATGTAGAAGTAAACCTGATCATAACAGATTACTGTATGCCAGGAATGACAGGCTATGATCTGCTGAAAAAAATCAAGaaagatattGATTTGCAGGAATCTAAATCTCTCAAAGACATACCAGTTGTGATAATGTCCTCAGAGAATGTCCCATCAAGAATAAACAGATGCCTAGAAGAAGGAGCAGAAGAATTTTTTCTGAAACCAGTTCAGCAGTCAGATGTAAACAAGCTCAAGCCACATTTGCTGAAGTCAAAAGTTAAGGAAGAGAACGACCAATTCATCAATAACAAAAGGAAGGGCATGGAAGAAACCGATTCACCAGATAAAACCAGAGCAAAGATATAG 555 0.3856 MAAETQFQFHVLAVDDSLIDRMLIERLLKTSSFQVTAVDSGSKALKLLGLNEDEQRNADTFSVASDTHQDVEVNLIITDYCMPGMTGYDLLKKIKKDIDLQESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKSKVKEENDQFINNKRKGMEETDSPDKTRAKI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2329 184 Gene3D - 10 181 - -
Sto4g2329 184 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 183 IPR045279 GO:0009736
Sto4g2329 184 ProSiteProfiles Response regulatory domain profile. 10 152 IPR001789 GO:0000160
Sto4g2329 184 MobiDBLite consensus disorder prediction 158 184 - -
Sto4g2329 184 CDD REC_typeA_ARR 11 147 - -
Sto4g2329 184 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 1 183 - -
Sto4g2329 184 SUPERFAMILY CheY-like 9 153 IPR011006 -
Sto4g2329 184 SMART REC_2 9 151 IPR001789 GO:0000160
Sto4g2329 184 Pfam Response regulator receiver domain 11 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2329 Sto-Chr4 24677947 24678990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2329 1 159 Response Regulator Gene Family AT3G57040 69.375 4.72e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto4g2329 Response_reg 6e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2329 K14492 - gmx:100787436 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2329 4 24677947 24678990 Sto7g2111 7 26683006 26687038 CCT