Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2318 ATGGTCATACTTTATGCTCAGGTTGCAAACCCAGGGTCCACAATCGGTGCCCTACTTGTAGACACGAGCTTGGCAATATCAGATGCCTGGCATTGGAGAAGACCTTATAACTGTCCATATGCTGGTTCAGAATGCACTGTCATTGGTGATATACCGTATCTGGTGGCCCATCTGAAAGATGATCACAAAGTGGACATGCACAGTGGTAGCACTTTTAACCATCGATATGTCAAATCAAATCCGCAAGAAGTCGAAAATGCGACGTGGATGCTTACGGTGTTCAGTTGCTTTGGTCAGTATTTTTGTCTACACTTCGAAGCTTTCCAGCTGGGAATGGCTCCAGTGTATATAGCCTTCCTGCGATTTATGGGTGATGATAACGAGGCAAagaactatagctatagtctaGAGGTGGGTGGAAATGGGAGGAAGATGACATGGCAGGGTGTGCCTAGAAGCATTAGGGACAGCCACCGCAAGGTTAGGGACAGTTTTGATGGTCTAATCATTCAGAGGAACATGGCTCTCTTCTTTTGTGGGGGTGACAGGAAAGAATTGAAGCTACGGGCAGCCGCGAAAAGACCACCTGAGGAACAAGGAGAGAGGCAAAACTCAGGTTCCAAATTTAATACGTTCAAAAAAGTGGAAGTAGGAGAAGGGGCGTTTGGGCCATGGATGTTGGTACGCCACCCAAAACCAAATCAGAACCCTCAAACGAAAGGCGAAGATCAGAAGCAACCCTCAAAAAATGAAGTGGTTACACACCAGAGAAGCAACCCCAAAATCAAAAAGATGTTAGTAAATGAAAGTGCATCGTTTAACCAGTGA 828 0.4493 MVILYAQVANPGSTIGALLVDTSLAISDAWHWRRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMTWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFCGGDRKELKLRAAAKRPPEEQGERQNSGSKFNTFKKVEVGEGAFGPWMLVRHPKPNQNPQTKGEDQKQPSKNEVVTHQRSNPKIKKMLVNESASFNQ 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2318 275 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 62 190 IPR008974 GO:0005515
Sto4g2318 275 Pfam Seven in absentia protein family 34 189 IPR018121 GO:0005737|GO:0006511|GO:0007275
Sto4g2318 275 SUPERFAMILY TRAF domain-like 34 185 - -
Sto4g2318 275 PANTHER OS05G0238200 PROTEIN 34 195 - -
Sto4g2318 275 MobiDBLite consensus disorder prediction 251 275 - -
Sto4g2318 275 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 34 195 - -
Sto4g2318 275 CDD Sina 64 189 - -
Sto4g2318 275 Gene3D Classic Zinc Finger 35 61 - -
Sto4g2318 275 MobiDBLite consensus disorder prediction 191 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2318 Sto-Chr4 24624583 24626841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2318 31 198 C3H Transcription Factor Family AT2G41980 77.515 3.24e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2318 K04506 - qsu:112009971 329.331