Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2296 ATGAATAGGTGCTTCAACCAGATCCATTCTGCAACTATAAATTTTGGTATAGAGTATAAGCTCTTTGACATTATTGCTAAGGCAAATGGGAGACACGTGTCGGCCATTGAAGTCGCCTCTCAGCTCCCAAGTTCATTGCAACACCAAGACTTGGCTTTTAGGTTGGATCGTGTGTTAAGGCTTCTTGCTACTCAATCTCTTCTTACTTGTTCCTATGGCGGCGCCAATAGTAGTGGTGACGAGACTCAAAGAGAGAGGCTCTATGGAATTTCTCCCATTGGGAAATTCTTTGTGAGTGCTAATGAAAACACTAGTGGATCGGTGGCTTTGATCTCAACATTCCTGGCTTATCCAGCAATTGTGGATGCTTGgCTCAATTTTAAGAATGCAATAATAGACAAAGACACTGATGACCTATACAAGAAAGTTCATGGAATGGCCTTGTACCAATACGCAGAGATAGACCCAATATGGAATAACTTGTTCAACAAAGCAATGGAAAATCTTAGCTTTATAATGATGACAAGGATACTTGAAATATACAATGGATTTGAGGGAATATCAACACTTGTTGATGTGGGAGGTGGCACAGCTCAAACCTTAAAAATGATACTCTCTAAGTATCCTTCTATTAAGgctattaattttgatttgccTCTTGTCATTCAAAATGCACCACCCCATCCagGGATAGAGCATGTGGAAGGAGATATGTTTGCAAGTATTCCTAAAGGTGATGCTATAATATTGAAGAATATATGCCATAATTGGTCAGATGAAAGTTGCATAAGAATTCTGAGTGAATGCTACAAAGCATTGCCTGAAAATGGGAAAGTGATTGTTTTGGATGTCATAATGGgagaagaagttgaagaatcAGAAGAAGCCAAGCTTGCTTCCACACTTGACAACCTCATGTTTGTTTATGGTGGCAGAGAAAGAAGTGagaaagagtttgagtcttTGTGCAAACCTTCTGGATTTTCTGGCATCAAACTTGCTTGCCGTGCCTTCCATCAAGGAATTGTGGaattttacaaataa 1044 0.3736 MNRCFNQIHSATINFGIEYKLFDIIAKANGRHVSAIEVASQLPSSLQHQDLAFRLDRVLRLLATQSLLTCSYGGANSSGDETQRERLYGISPIGKFFVSANENTSGSVALISTFLAYPAIVDAWLNFKNAIIDKDTDDLYKKVHGMALYQYAEIDPIWNNLFNKAMENLSFIMMTRILEIYNGFEGISTLVDVGGGTAQTLKMILSKYPSIKAINFDLPLVIQNAPPHPGIEHVEGDMFASIPKGDAIILKNICHNWSDESCIRILSECYKALPENGKVIVLDVIMGEEVEESEEAKLASTLDNLMFVYGGRERSEKEFESLCKPSGFSGIKLACRAFHQGIVEFYK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2296 347 Pfam O-methyltransferase domain 124 329 IPR001077 GO:0008171
Sto4g2296 347 SUPERFAMILY "Winged helix" DNA-binding domain 1 101 IPR036390 -
Sto4g2296 347 PANTHER O-METHYLTRANSFERASE 7 347 IPR016461 GO:0008168
Sto4g2296 347 PIRSF O-mtase 1 347 IPR016461 GO:0008168
Sto4g2296 347 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 347 IPR016461 GO:0008168
Sto4g2296 347 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 7 347 - -
Sto4g2296 347 Pfam Dimerisation domain 17 63 IPR012967 GO:0046983
Sto4g2296 347 Gene3D Vaccinia Virus protein VP39 100 347 IPR029063 -
Sto4g2296 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 345 IPR029063 -
Sto4g2296 347 CDD AdoMet_MTases 189 286 - -
Sto4g2296 347 Gene3D - 1 97 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2296 Sto-Chr4 24425168 24428789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2296 17 347 Monolignol Biosynthesis Gene Families AT5G54160 46.547 1.82e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2296 - - gmx:100784030 383.259