Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2295 ATGGCTTTGGATCCAAAACAGAATCTAGTTCACCAccatgaagaagaaggagaagattcttctttcctttcagCCATGAACATGTGCTTCACTCATATCCATTCTGCAGCACTAAATTTTGGTATAGATCATAAGATCTTTGACATTATTGCTAAGGCAAATGGGAGACACGTGTCAGCAATCGAAGTCGCTTCTCAGCTCCAAAGTTCATTGCAACACCAAGACTTGGCTTTCAGGCTGGATCGTGTGTTAAGGCTTCTTGCTACTCAATCTCTTCTTACTTGTTCCTACGGCGTCAATAGTGGTGACGACACTCAAAGAGAGAGGCTCTATGGGATTTCTCCCATTGGGAAATTCTTTGTGAGTGATAATGAAAACACTAGTGGATTCGTAGCTTTTATGTCATCGTTAATGGGTTATCCAGCGCTTGTGGATGCTTGGCTCAATTTTAAGAATGCAATAATAGACAAAGACACTGATGACCTATACAAGAAAGTTCATGGAATTCCCTTGTACCAATACTTAGAGAAAGATCAAAAATTGAACAACTTGTTCAACAAAGCAATGGAAAATCTTAGCTTTATAATGATGAGAAGGACACTTGAAGTATACAAAGGATTTGAAGGAATATCAACACTTGTTGATGTGGGAGGTGGCATAGAGCATGTGGGAGGAGATATGTTTGCAGATGTTCCCAAAAGTGATGCCATAATATTGAAGGTTAGTGTCAGAAATGAGAAAGAAGTGagaaagagtttgagtcttTGTGCAAACGCTCTGGATTTTCAGCCTTCAAACTTGCTTGCCCTGCCTTCCATCAAGGAATCCTAG 831 0.3755 MALDPKQNLVHHHEEEGEDSSFLSAMNMCFTHIHSAALNFGIDHKIFDIIAKANGRHVSAIEVASQLQSSLQHQDLAFRLDRVLRLLATQSLLTCSYGVNSGDDTQRERLYGISPIGKFFVSDNENTSGFVAFMSSLMGYPALVDAWLNFKNAIIDKDTDDLYKKVHGIPLYQYLEKDQKLNNLFNKAMENLSFIMMRRTLEVYKGFEGISTLVDVGGGIEHVGGDMFADVPKSDAIILKVSVRNEKEVRKSLSLCANALDFQPSNLLALPSIKES 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2295 276 Gene3D Vaccinia Virus protein VP39 123 221 IPR029063 -
Sto4g2295 276 Pfam O-methyltransferase domain 147 220 IPR001077 GO:0008171
Sto4g2295 276 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 276 IPR016461 GO:0008168
Sto4g2295 276 Gene3D - 5 120 IPR036388 -
Sto4g2295 276 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 219 260 - -
Sto4g2295 276 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 219 - -
Sto4g2295 276 Gene3D Vaccinia Virus protein VP39 222 260 IPR029063 -
Sto4g2295 276 Pfam Dimerisation domain 45 88 IPR012967 GO:0046983
Sto4g2295 276 PANTHER O-METHYLTRANSFERASE 219 260 IPR016461 GO:0008168
Sto4g2295 276 PANTHER O-METHYLTRANSFERASE 6 219 IPR016461 GO:0008168
Sto4g2295 276 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 260 IPR029063 -
Sto4g2295 276 SUPERFAMILY "Winged helix" DNA-binding domain 19 124 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2295 Sto-Chr4 24409991 24412966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2295 18 240 Monolignol Biosynthesis Gene Families AT5G54160 34.241 2.50e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2295 - - ag:AAB48059 202.986