Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2293 ATGGGTTTTGATGAAGAATATGATGCTTCTTTCTTTTCAGCCATGCTTGGGTGCTTCACCCAGATCCATTCTGCTGCACTAAATTTTGCTATAGAGTATAAGATCTTTGATATTATTGCTAAGGAGAATGGGGGACAACACGTGTCGGCCATTGAAGTTGCTTCTCAGCTTCCGAATTCTGTACAACACTCAGATTTGGCTTTCAGGCTAGATCGTGTGTTAAGGCTTCTTGCTACTCACTCTTATCTTACTTGTTCCTATGGCGCCAATAGTGGTGGCGACACTACTCAAAGAGAGAGGCTCTATGGAATTTCTCCTGTTGGGAAATTCTTTGTGAGTGCCAATGAGAAAACTAGTGGATCCGTGGCTTTTATATCATCATTCCTGAGTTATCCAGCACTTGTGGATGCTTGGCTCAATTTCAAGATTTCAATAATAGACAAAGACACTAGTGACGTCTTCAACAAAGTTCATGGAATGCCCTTGTTCCAATACGGAGAGAAAGACCCAAGATGGAGTAAGTTGTTCAACAAAGCAATGGAAAACCTGAGCTTTATAGTGATGAAGAAGATCCTTGAAACATACAAAGGATTTGAGGGAATTTCAACACTTGTAGATGTGGGAGGTGGCACTGCCCAAACCCTAACAATGATACTCTCTAAGTATCCTTCAATTAAGGCCATTAATTTTGATCGTCCCCATGTCATTCAAAATGCACTACCCCATccagGGATAGAGTATGTTGGAGGAGATATGTTTGCGAGTATTCCCAAAGGTGATGCCATAATGTTGAAGAATGTATGCCTTAATTGGTCCGATGAAAACATCATAAAAATTCTGAGGAAATGCTATGAAGCATTACCAAaacatggaaaggtgattgTTTTGGAGGTGATAATGACAGAAGAAGTTGATGAATCAGAAGAAGCCAAGCTTATTGCTACCATTGACAACACCATGTTTGTTCATGGTGGCATAGAAAGAACTGAGAAAGAGTATGAGTTTTTGTCCAAACAAGCTGGATTTTCTAGCACCAAACTTGCTTGTCATGCCCTCCATCAAGGAATCATAGAATTTTACAAATAA 1086 0.3913 MGFDEEYDASFFSAMLGCFTQIHSAALNFAIEYKIFDIIAKENGGQHVSAIEVASQLPNSVQHSDLAFRLDRVLRLLATHSYLTCSYGANSGGDTTQRERLYGISPVGKFFVSANEKTSGSVAFISSFLSYPALVDAWLNFKISIIDKDTSDVFNKVHGMPLFQYGEKDPRWSKLFNKAMENLSFIVMKKILETYKGFEGISTLVDVGGGTAQTLTMILSKYPSIKAINFDRPHVIQNALPHPGIEYVGGDMFASIPKGDAIMLKNVCLNWSDENIIKILRKCYEALPKHGKVIVLEVIMTEEVDESEEAKLIATIDNTMFVHGGIERTEKEYEFLSKQAGFSSTKLACHALHQGIIEFYK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2293 361 Pfam Dimerisation domain 26 78 IPR012967 GO:0046983
Sto4g2293 361 CDD AdoMet_MTases 203 295 - -
Sto4g2293 361 PANTHER O-METHYLTRANSFERASE 13 358 IPR016461 GO:0008168
Sto4g2293 361 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 358 - -
Sto4g2293 361 SUPERFAMILY "Winged helix" DNA-binding domain 6 115 IPR036390 -
Sto4g2293 361 Gene3D Vaccinia Virus protein VP39 115 361 IPR029063 -
Sto4g2293 361 PIRSF O-mtase 3 361 IPR016461 GO:0008168
Sto4g2293 361 Pfam O-methyltransferase domain 148 343 IPR001077 GO:0008171
Sto4g2293 361 Gene3D - 3 111 IPR036388 -
Sto4g2293 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 361 IPR016461 GO:0008168
Sto4g2293 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2293 Sto-Chr4 24383065 24386889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2293 8 361 Monolignol Biosynthesis Gene Families AT5G54160 45.787 3.60e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2293 - - cam:101492092 348.591