Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2288 ATGGCTTTAGTAGATAGTAAAGAAAACAAAGGGTTAGTTCATGTTCATCATCATCCCCATGATGAAGAATATGATTCTTCATTCCTTCTAGCCATGACTGGGTGCCTTAACCAGATTCATTCTGCTGCTCTCAATTTTGCCGTAgagcacaagttgtttgatatcATAGCCAAGGCAAATGGGAGACACGTGTCGGCTTCTGAGGTTGCTTCTCACTTTCCAACTTCAGTTCAACACCAAGACTTGGCTTTCAGGCTAGATCGTGTCCTGAGGCTTCTTGCTTCTCAGTCCTATCTTACTTGTTCTTATAATGACGCCAGTCCTGGTGGCGACAACCATGTTAGAGAGAGACTCTATGGGATTTCACCGGTGGGGAAATTCTTTGTGAGTGATAACCAAAATACTAACGGATACTTGGCTTTGTTCGCACCATTCTTGAATCATCCAGCACTTCTGAATACTTGgTTGAATTTTAAGGATGCAATAATAGACAAAGATGATGATGACCTATTCAAGAAAGTTCATGGAATAGCCATGTACCAATATGAAGAGAGAGACCCAACTTTGAATAGTGTTTTCAACAAGTCAATGGCTAACCTTTGCAATATAGAAATCAGAAGGATTCTTGAAGTGTACAAAGGATTTGAAGGAATTTCAACACTTGTGGATGTGGGAGGTGCATTACCACAAGGTGGAAAAGTGATTGTTGTGGAATTCATAATGCCAGAAGCAATTGATGGATCATTAGAAGCCAATTTGGTATCCTCCATTGACAACTTAATGTTCATTCATGATGGAagagaaagaactgaaaaagaATTTGAGTCTCTTTGCAAACGATCTGGATTTTCTTCTTTCAAAGTTGCTTCTCGTGCTTTCTCTGCTCTTGGAATCATGGAGTTTTGCAAATAA 912 0.3805 MALVDSKENKGLVHVHHHPHDEEYDSSFLLAMTGCLNQIHSAALNFAVEHKLFDIIAKANGRHVSASEVASHFPTSVQHQDLAFRLDRVLRLLASQSYLTCSYNDASPGGDNHVRERLYGISPVGKFFVSDNQNTNGYLALFAPFLNHPALLNTWLNFKDAIIDKDDDDLFKKVHGIAMYQYEERDPTLNSVFNKSMANLCNIEIRRILEVYKGFEGISTLVDVGGALPQGGKVIVVEFIMPEAIDGSLEANLVSSIDNLMFIHDGRERTEKEFESLCKRSGFSSFKVASRAFSALGIMEFCK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2288 303 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 226 IPR029063 -
Sto4g2288 303 PANTHER O-METHYLTRANSFERASE 228 303 IPR016461 GO:0008168
Sto4g2288 303 PANTHER O-METHYLTRANSFERASE 22 227 IPR016461 GO:0008168
Sto4g2288 303 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 227 290 IPR029063 -
Sto4g2288 303 Pfam O-methyltransferase domain 155 226 IPR001077 GO:0008171
Sto4g2288 303 Pfam O-methyltransferase domain 227 284 IPR001077 GO:0008171
Sto4g2288 303 Gene3D Vaccinia Virus protein VP39 228 303 IPR029063 -
Sto4g2288 303 Gene3D - 9 128 IPR036388 -
Sto4g2288 303 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 303 IPR016461 GO:0008168
Sto4g2288 303 SUPERFAMILY "Winged helix" DNA-binding domain 23 132 IPR036390 -
Sto4g2288 303 Gene3D Vaccinia Virus protein VP39 132 227 IPR029063 -
Sto4g2288 303 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 22 227 - -
Sto4g2288 303 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 228 303 - -
Sto4g2288 303 PIRSF O-mtase 226 303 IPR016461 GO:0008168
Sto4g2288 303 PIRSF O-mtase 12 228 IPR016461 GO:0008168
Sto4g2288 303 Pfam Dimerisation domain 43 94 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2288 Sto-Chr4 24318450 24320961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2288 227 303 Monolignol Biosynthesis Gene Families AT5G54160 46.835 7.64e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2288 - - gmx:100798347 198.364