Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2286 ATGGAATTGAATGCTAAAGAGAAGCATAGTGAAAGTACAAAAGATGATGATTCTTTCATGGTTTCAGCCATGAATGTGTTCACTGGCCAGATTGTATCTGCTGCTTTAAATGCTGCTATTGAGCTCAACTTATTCGAGATTATAGCTAAGGCAGATGGGAGACACGTGTCAGTCACTGAAATTGCTTCTCAACTTCCAAAATTAACTTCACATGAGATTGTAACTTCTAAGCTGGATCGTCTCTTAAGGCTTCTTGTCACTCACTCTCTTCTTACTTGTTCCTATGTCGCCAATCAAGGTGACGACACTCAAAGAcagagaggaagagaaagacTCTATGCCATTTCTCCCATTGGAAAATTCTTTGTTAGTGGTCACCACAACAACAATGGTGAATATTTGGGTTTCTCCTCATTATTGCTGGCTCATCCAACATTTGCGGATGCTTGGCTCAATTTTAAGAATGCAATAATAGACGAAGAAGACACCAACCTCTTCAAGAAAGTTCACGGATTACCATTGTATCAATACTCAAACAAAGACCCAAAATTGGGTAATTTGTTCAACAAAGCAATGGAAGATCTTAGCTTTATATGGATGAAAAGGATACTTGAAATATACAAAGGATTTGAGGGAATTTCAACACTTGTAGATGTGGGAGGTGGTAATGCTCAAACCCTAAAAATGATACTCTCTAAGTATCCTTCAATTAAGgctattaattttgatttgccCCATGTCATTCAAAATGCACCACCCCATCCAGGGATAGAGCATGTTGGAGGAGATATGTTTGCAAGTGTTCCCAAAGGTGATGCCATAATTTTGAAGAATATATGCCACAATTGGTCAGATGAAAGTAGCATAAAAATTCTAAGAAAATGCTACGATTCATTGCCAGAAAATGGGAAGGTGATTGTTTTGGAGTTCATAATGCCAGAAGAAGTTGAGCAATCAGAAGAAGCCAAGCTTATTTCCACCGTTGACAGCACCATGTTTCTTCATGGTGGCAGAGCAAGAAGTGagaaagagtttgagtcttTATCCAAACAATCTGGATTTTCTGCCTTCAAACTTGCTTGCCATGCCTTCAATATTCATGGAGTCAtagaattttataaataa 1125 0.3627 MELNAKEKHSESTKDDDSFMVSAMNVFTGQIVSAALNAAIELNLFEIIAKADGRHVSVTEIASQLPKLTSHEIVTSKLDRLLRLLVTHSLLTCSYVANQGDDTQRQRGRERLYAISPIGKFFVSGHHNNNGEYLGFSSLLLAHPTFADAWLNFKNAIIDEEDTNLFKKVHGLPLYQYSNKDPKLGNLFNKAMEDLSFIWMKRILEIYKGFEGISTLVDVGGGNAQTLKMILSKYPSIKAINFDLPHVIQNAPPHPGIEHVGGDMFASVPKGDAIILKNICHNWSDESSIKILRKCYDSLPENGKVIVLEFIMPEEVEQSEEAKLISTVDSTMFLHGGRARSEKEFESLSKQSGFSAFKLACHAFNIHGVIEFYK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2286 374 PIRSF O-mtase 1 374 IPR016461 GO:0008168
Sto4g2286 374 PANTHER O-METHYLTRANSFERASE 9 374 IPR016461 GO:0008168
Sto4g2286 374 Gene3D Vaccinia Virus protein VP39 128 374 IPR029063 -
Sto4g2286 374 CDD AdoMet_MTases 215 307 - -
Sto4g2286 374 Gene3D - 1 122 IPR036388 -
Sto4g2286 374 Pfam Dimerisation domain 35 86 IPR012967 GO:0046983
Sto4g2286 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 374 IPR016461 GO:0008168
Sto4g2286 374 Pfam O-methyltransferase domain 150 355 IPR001077 GO:0008171
Sto4g2286 374 SUPERFAMILY "Winged helix" DNA-binding domain 17 126 IPR036390 -
Sto4g2286 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 372 IPR029063 -
Sto4g2286 374 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 9 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2286 Sto-Chr4 24295963 24299425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2286 16 374 Monolignol Biosynthesis Gene Families AT5G54160 47.645 3.50e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2286 - - ag:AAB48059 369.007