Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2285 atgaatgaagAAGCAAGCATGGCTTTGAATTCTAAGGATCATCATGAAGATGATTCTTTTCTCATTTCAGCCATGAATATATGCCATGTCCGTATTTTATCTGCTGCTTTAAATGCTGCTATTGAGCTCAACTTATTCGAGATTATAGCTAAGGCAGATGGGAGACATGTGTCAGTCACTGAAATTGCTTCTCAACTTCCAAATTCAACTTCACATGAGATTATAACTTTCAAGCTGGATCGTCTCTTAAGGCTTCTTGCTAGTCATTCCCTTTTTACTTGTTCGTATGTCGCCAATCAAAGTGACGAcaatgaaagagagagagaaagactcTATGCCATTTCCCCCATTGGAAAATTCTTTGTTAGTGGTCACCACAACAATGGTGGATATTTGGGTTTGTCCTCATTAATGGTGGCTCATCCAACACTTGTGGATGTTTGGCACAATTTTAAGAATGCAATAATAGATGAAGACACCAACCTCTTCAAGAAAGTTCATGGAATGCCCTTGTACCAATACTCAAAGATAGACCCAATATGGAATAACTTGTTCAACAAATCAATGGAAAATCTTAGCTTTATATGGATGAAAAGGATACTTGAAATATACGAAGGATTTGAGGGAATATCAACACTCGTGGATGTGGGAGGTGGTAATGCTCAAACCCTAAAAATGATACTCACTAAGTATCCTTCAATTAAGgctattaattttgatttgccCCATGTCATTCAAAATGCACCACCCCATCCAGgGATAGAGCATGTTGGAGGAGATATGTTTGCAAGTGTTCCCAAAGGTGATGCCATAATTTTGAAGAGTATCTGCCACAATTGGTCAGATGAAAGTAGCATAAAAATCCTGAGAAAATGCTACGAGTCATTGCCAGAAAATGGGAAGGTGATTATTTTGGAGTTGGTAATGCCAGAAGAAGTTGAGCAATCGAAAGAAGCCAAGCTTGTTTCAGAAATTGACAACTACATGTCGTTTATTGTTGAGGGAAGAGTAAGAAGTGAGAGAGAGTTCAAGTCTTTGTGCAAACATTCTGGATTTTCTGCCTTCAAACTTGCTTGCCGTGCCTTCAATGTTCAAGGACTCATAGAATTTTACAAATAA 1119 0.3646 MNEEASMALNSKDHHEDDSFLISAMNICHVRILSAALNAAIELNLFEIIAKADGRHVSVTEIASQLPNSTSHEIITFKLDRLLRLLASHSLFTCSYVANQSDDNERERERLYAISPIGKFFVSGHHNNGGYLGLSSLMVAHPTLVDVWHNFKNAIIDEDTNLFKKVHGMPLYQYSKIDPIWNNLFNKSMENLSFIWMKRILEIYEGFEGISTLVDVGGGNAQTLKMILTKYPSIKAINFDLPHVIQNAPPHPGIEHVGGDMFASVPKGDAIILKSICHNWSDESSIKILRKCYESLPENGKVIILELVMPEEVEQSKEAKLVSEIDNYMSFIVEGRVRSEREFKSLCKHSGFSAFKLACRAFNVQGLIEFYK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2285 372 Pfam O-methyltransferase domain 148 353 IPR001077 GO:0008171
Sto4g2285 372 Gene3D Vaccinia Virus protein VP39 127 372 IPR029063 -
Sto4g2285 372 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 3 372 - -
Sto4g2285 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 370 IPR029063 -
Sto4g2285 372 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
Sto4g2285 372 SUPERFAMILY "Winged helix" DNA-binding domain 18 125 IPR036390 -
Sto4g2285 372 PANTHER O-METHYLTRANSFERASE 3 372 IPR016461 GO:0008168
Sto4g2285 372 CDD AdoMet_MTases 212 304 - -
Sto4g2285 372 PIRSF O-mtase 1 372 IPR016461 GO:0008168
Sto4g2285 372 Gene3D - 3 121 IPR036388 -
Sto4g2285 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 372 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2285 Sto-Chr4 24282170 24284807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2285 17 372 Monolignol Biosynthesis Gene Families AT5G54160 47.619 3.36e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2285 - - gmx:100787536 377.481