Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2283 ATGGCTTTGAATTCTAAGGATCATCAAGAAGATGATTCTTTTCTCATTTCAGCCATGAATATGTGCCATGGCCATATTTTATCTTCTGCTTTAAATGCTGCTATTGAGCTCAACTTATTCGAGATTATAGCTAAGGCAGATGGGAGACATGTGTCAGTCACTGAAATTGCTTCTCAACTTCCAAATTCAACTTCACATGAGATTATAGCTTTCAAGCTGGATCGTCTCTTAAGGCTTCTTGCTAGTCACTCTCTTCTTACTTGTTCATATGTCGCCAATCAAAGTGACGACcctgaaggagagagagaaagactcTATGCCATTTCCCCCATTGGAAAATTCTTTGTTAGTGGTCACAACAACAATGGTGGATATTTGGGTTTGTCCTCATTAATGGTGGCTCATCCAACACTTGTGGATGTTTGGTTCAATTTTAAGAATGCAATAATAGATGAGGACCCCAACCTCTTCAAGAAAGTTCATGGAATGCCCATCTACCGATACTCAAAGATAGACCCAATATGGAATAACTTGTTCAACAAAGCAATGGAAAATCTTAGCTTTATATGGATGAAAAGGATACTTGAAATATACAAAGGATTTGAGGGAATTTCAACACTTGTGGATGTGGGAGGTGGTAATGCTCAAACCCTAAAAATGATACTCTCTAAGTATCCTTCAATTAAggttattaattttgatttgccCCATGTCATTCAAAATGCACCACCCCATCCAGggATAGAGCATGTTGGAGGAGATATGTTTGCAAGTGTTCCCAAAGGTGATGCCATAATTTTGAAGAGTGTCTGCCACAATTGGTCAGATGAAAGTAGCATAAAAATTCTGAGAAAATGCTACGAGTCATTGCCAGAAAATGGGAAGGTGATTATTTTGGAGTTGGTAATGCCAGAAGAAGTTGAGCAATCAGAAGAATGCCAGCTTGTTTCAAACATTGACAACTACATGTTTATGGTTGAGGGAAGAGTAAGAAGTGAGAGAGAGTTTAAGTCTTTGTGCAAACATTCTGGATTTTCTGCCTTCAAATTTGCTTGCTGTGCCTTCAATGTTCAAGGAGTCATAGAATTTTACAAATAA 1098 0.3643 MALNSKDHQEDDSFLISAMNMCHGHILSSALNAAIELNLFEIIAKADGRHVSVTEIASQLPNSTSHEIIAFKLDRLLRLLASHSLLTCSYVANQSDDPEGERERLYAISPIGKFFVSGHNNNGGYLGLSSLMVAHPTLVDVWFNFKNAIIDEDPNLFKKVHGMPIYRYSKIDPIWNNLFNKAMENLSFIWMKRILEIYKGFEGISTLVDVGGGNAQTLKMILSKYPSIKVINFDLPHVIQNAPPHPGIEHVGGDMFASVPKGDAIILKSVCHNWSDESSIKILRKCYESLPENGKVIILELVMPEEVEQSEECQLVSNIDNYMFMVEGRVRSEREFKSLCKHSGFSAFKFACCAFNVQGVIEFYK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2283 365 Gene3D - 26 194 IPR036388 -
Sto4g2283 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 365 IPR016461 GO:0008168
Sto4g2283 365 SUPERFAMILY "Winged helix" DNA-binding domain 11 119 IPR036390 -
Sto4g2283 365 Pfam O-methyltransferase domain 142 346 IPR001077 GO:0008171
Sto4g2283 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 363 IPR029063 -
Sto4g2283 365 Gene3D Vaccinia Virus protein VP39 176 354 IPR029063 -
Sto4g2283 365 PANTHER O-METHYLTRANSFERASE 16 365 IPR016461 GO:0008168
Sto4g2283 365 CDD AdoMet_MTases 206 298 - -
Sto4g2283 365 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 16 365 - -
Sto4g2283 365 Pfam Dimerisation domain 30 81 IPR012967 GO:0046983
Sto4g2283 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2283 Sto-Chr4 24252238 24254438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2283 11 365 Monolignol Biosynthesis Gene Families AT5G54160 48.179 2.22e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2283 - - cam:101492092 369.392