Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2282 atgaatgaagGAGCAAGCATGGCTTTGAATTCTTATAAGGATCATCATGAAGATGATTCTTTTCTCATTTCAGCCATGAATATGTGTCATGGCCATATTTTATCTGCTGCTTTAAATGCTGCTATTGAGCTCAACTTATTCGAGATTATAGCTAAGGCAGATGGGAGACACGTGTCAGTCACTGAAATTGCTTCTCAACTTCCAAATTCATCAACTTCACATGAGATTATAGTTTTCAGGCTGGATCGTCTCTTAAGGCTTCTTGCTAGTCACTCTCTTCTTACTTGTTCCTATGTCGCCAATCAAAGTGACGAcaatgaaagagagagagaaagactcTATGCCATTTCCCCCATTGGAAAATTCTTTGTTAGTGGTCACCACAACAATGGTGGATATTTGGGTTTGTCCTCATTAATGGTGGCTCATCCATCATTTGTGGATGTTTGGTTCAATTTTAAGAATGCAATAATAGACGAAGACCCCAACCTCTTCAAGAAAGTTCATGGAATGCCATTGTACCAATATGCAAAGATAGACCCAATATGGAATAACTTGTTCAACAAAGCAATGGAAAATCTTAGCTTTATAGTGATGAGAAGGATACTTAAAATATACAAAGGATTTGAGGGAATTTCAACACTTGTGGATGTGGGAGGTGGTAATGCTCAAACCCTAAAAATGATACTCTCCAAGTATCCTTCAATTAAGgctattaattttgatttgccCCATGTCATTCAAAATGCACCACCCCATCCAGggATAGAGCATGTTGGAGGAGATATGTTTGCCAGTGTTCCCAAAGGTGATGCCATAATTTTGAAGAGTATCTGCCACAATTGGTCAGATGAAAGCAGCATAAAAATTCTGAGAAAATGCTACGATTCATTGCCAGAAAATGGGAAGGTGATTATTTTTGAGTTCATAATGCCAGAAGAAGTTGAGCAATCAGAAGAAGCCAAGCTTGTTTCAGAGATTGACAACTACATGTTTATTGTTGAGGGAAGAGTAAGAAGTGAGAGAGAGTTCAAGTCTTTGTGCAAACGTTCTGGATTTTCTGCCTTCAAACTTGCTTGCCGTGCCTTCAATGTTCAAGGACTCATAGAATTTTACAAATAA 1122 0.3645 MNEGASMALNSYKDHHEDDSFLISAMNMCHGHILSAALNAAIELNLFEIIAKADGRHVSVTEIASQLPNSSTSHEIIVFRLDRLLRLLASHSLLTCSYVANQSDDNERERERLYAISPIGKFFVSGHHNNGGYLGLSSLMVAHPSFVDVWFNFKNAIIDEDPNLFKKVHGMPLYQYAKIDPIWNNLFNKAMENLSFIVMRRILKIYKGFEGISTLVDVGGGNAQTLKMILSKYPSIKAINFDLPHVIQNAPPHPGIEHVGGDMFASVPKGDAIILKSICHNWSDESSIKILRKCYDSLPENGKVIIFEFIMPEEVEQSEEAKLVSEIDNYMFIVEGRVRSEREFKSLCKRSGFSAFKLACRAFNVQGLIEFYK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2282 373 Gene3D Vaccinia Virus protein VP39 184 362 IPR029063 -
Sto4g2282 373 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 23 373 - -
Sto4g2282 373 Pfam O-methyltransferase domain 150 354 IPR001077 GO:0008171
Sto4g2282 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 371 IPR029063 -
Sto4g2282 373 CDD AdoMet_MTases 214 306 - -
Sto4g2282 373 Gene3D - 33 202 IPR036388 -
Sto4g2282 373 PIRSF O-mtase 4 373 IPR016461 GO:0008168
Sto4g2282 373 Pfam Dimerisation domain 37 89 IPR012967 GO:0046983
Sto4g2282 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 373 IPR016461 GO:0008168
Sto4g2282 373 PANTHER O-METHYLTRANSFERASE 23 373 IPR016461 GO:0008168
Sto4g2282 373 SUPERFAMILY "Winged helix" DNA-binding domain 18 127 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2282 Sto-Chr4 24227861 24230167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2282 18 373 Monolignol Biosynthesis Gene Families AT5G54160 47.486 4.88e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2282 - - gmx:100787536 368.622