Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2281 ATGGCTTTAGATAGTAAAGAAAAGCAAGTGTTAGCTCAGAATCTTCcccatgaagaagaagaagattcttCACTCCTTTCAGCCATGATTGGGTGCATTGCCCAGATTCCTTCTGCTGCTTTAAACTTTGCTGTGCAACACAAGATATTTGATATCATAGCTAAGGCAAATGGGAGACACGTGTCAGCTGCTGAGGTTGCTTCTCACTTTCCAACTTCAGCTCAACATCAAGACTTGGCTTTCAGGCTAGATCGTGTGTTGAGGCTTCTTGCTACTCAGTCATATCTTACTTGTTCTTATGACGCCAATCCTGGTGGCGACAACCATATTAGAGAGAGACTCTATGGAATTTCACCAATTGGGAAATTCTTTGTGAGTGCTAACCAAAATACTAGTGGATACCTGGCTTTGTTCTCACCGTTCATGAATCATCCAGCGCTTGTGGAAACTTGGCTGAATTTTAAGGATGcaataattgacaaagatgtTAATGACCTATTCAAGAAAGTTCATGGAATAGGCATGTTCCAATATGAAGAGAGAGACCCAACATTGAATAGCATTTTCAACAAGTCAATGGCCAACCTTTGCCATATAGAAATAAGGAGGATTCTTGAAGTGTACAAAGGATTTGAAGGAATTTCAACACTTGTGGATGTGGGAGGTGGTATTGGCCAAAACCTCCAATTGATACTTTCTAAGTATCCTTCAATTAAGGGCATTAATTTTGATCTTCCTCATGTCATTCAAAATGCACCACCCCATCCAGCTCTGGCGTCAATCAACTTCGGAGCTCTCCAAGTAACGCCATACACCGCTGAGAACGTCAACTTCACAGACACCGCCAGCGAATCCTCTACCGTGAACCATTCAAGCTGTGGGAATCCAACAAAAGACTCGCCTCCTTCAACACCTCCTTCCTCCTCAACACCGTCCAATCCAAACACACCGTATCGCTCTCACAATTCGGAATCCAGATTGCTCCAAACGGCACCAAATTCTACGCAATCTGGATCAATTACAACGGCACAAGCAAATAAATTGACATATTCATCATCGAACAACCAAGCAAAGATGCTCCGATATCAAGTGACAGAGGTGGTGGAGAAGGGAGTTGGGCTTGCCGAAAGTGAAAGGCTTGCGAACAAATGGCCCCAAGTCTTCGTTGTTGCAGATGGCAGAGGAGAGAAAGAGCTGgCTGTGTGCCACAATTGGTCGGATGAAAATAGCATTAAAATTCTGAGGAAATGCTACGAAGCATTACCACAAAATGGTGGGAAAGTGATTGTTGTGGAGTTCATAATGCCAGAAGCAATTGATGGATCATTAGAAGCCAATTTTGTGTCATGCCTTGACACCTTAATGTTCATTCATGATGGAagagaaagaactgaaaaagaATTTGAGTCTCTTTCCAAAAGATCTGGATTTGCTTCTTTCAAAGTTGCTTCTCGTGCTTTCTCTGCTCTTGGAATCATGGAGTTTTACAAGTAA 1494 0.4103 MALDSKEKQVLAQNLPHEEEEDSSLLSAMIGCIAQIPSAALNFAVQHKIFDIIAKANGRHVSAAEVASHFPTSAQHQDLAFRLDRVLRLLATQSYLTCSYDANPGGDNHIRERLYGISPIGKFFVSANQNTSGYLALFSPFMNHPALVETWLNFKDAIIDKDVNDLFKKVHGIGMFQYEERDPTLNSIFNKSMANLCHIEIRRILEVYKGFEGISTLVDVGGGIGQNLQLILSKYPSIKGINFDLPHVIQNAPPHPALASINFGALQVTPYTAENVNFTDTASESSTVNHSSCGNPTKDSPPSTPPSSSTPSNPNTPYRSHNSESRLLQTAPNSTQSGSITTAQANKLTYSSSNNQAKMLRYQVTEVVEKGVGLAESERLANKWPQVFVVADGRGEKELAVCHNWSDENSIKILRKCYEALPQNGGKVIVVEFIMPEAIDGSLEANFVSCLDTLMFIHDGRERTEKEFESLSKRSGFASFKVASRAFSALGIMEFYK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2281 497 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Sto4g2281 497 Gene3D Vaccinia Virus protein VP39 128 291 IPR029063 -
Sto4g2281 497 SUPERFAMILY "Winged helix" DNA-binding domain 20 128 IPR036390 -
Sto4g2281 497 MobiDBLite consensus disorder prediction 313 339 - -
Sto4g2281 497 PANTHER O-METHYLTRANSFERASE 6 261 IPR016461 GO:0008168
Sto4g2281 497 PANTHER O-METHYLTRANSFERASE 400 497 IPR016461 GO:0008168
Sto4g2281 497 MobiDBLite consensus disorder prediction 282 298 - -
Sto4g2281 497 MobiDBLite consensus disorder prediction 282 339 - -
Sto4g2281 497 Gene3D - 5 124 IPR036388 -
Sto4g2281 497 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 255 IPR029063 -
Sto4g2281 497 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 400 497 - -
Sto4g2281 497 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 261 - -
Sto4g2281 497 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 497 IPR016461 GO:0008168
Sto4g2281 497 Pfam O-methyltransferase domain 401 477 IPR001077 GO:0008171
Sto4g2281 497 Pfam O-methyltransferase domain 151 255 IPR001077 GO:0008171
Sto4g2281 497 Gene3D Vaccinia Virus protein VP39 336 497 IPR029063 -
Sto4g2281 497 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 400 487 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2281 Sto-Chr4 24215607 24219732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2281 401 497 Monolignol Biosynthesis Gene Families AT5G54160 48.485 4.20e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2281 K13066 - gmx:100787536 245.358