Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2280 ATGTCAGCCATGATTCTGTGCTTCACCCAGATCCAATCCGGAGCCATAAATGCTGCCATCGAGCTCAACATATTCGACATCATAGCCAATAAgtctaatattaataatgggAGACACGTGTCGGCCACCGAAGTCGCTTCCGAGCTTCCGGCTTCGGCTCGGCACCAAAACTTGGTTCCCAAGTTGGATCGGCTTCTGAGGCTTCTCGCCAATCACTCCCTGCTTACTTGCTCCTACGGCGCCGCCAACGGAGATGGCGACTCCCAAGGAGAACGACTCTATGGAATTTCTTCTGTTGGGAAATTCTTTGTGAGTGGTAATGAAACCAAGGGAGGATATGTGGCTTTGAGCTCACTATTCCTAAGTTATGGAGCACTTCTGGATACTTGgCTCAATTTTAAGAATGCAATAATAGATGAAGATGCTGACATATTCCAGAAAATTCATGGAATACCCTTTTACCAATTCTCAAACAAAGACCCAAAATTGAATACCTTGTTCAACAAATCAATGGGAAACCTTAGCTTCACAATGATGAAGAAGCTACTTGAAGTGTACAAAGGATTTGAGGGAATTTCAACACTTGTGGATGTGGGAGGTGGCACTGGAAGAAACATAAGCATGGTAATCTCCAAGTACCCTTCTATAAAGgGGATAGAGCAtattggaggagatatgttTGAGGGTGTTCCTAAAGGTGATGCCATAATGTTGAAGAATGTATTGCACAATTGGTGGGATGAAAACAGCATAAAAATTCTGAAGAAATGCCATGAAGCATTGCCTGAAAACGGGAAGGTGATTGTTGTGGAATTCATAATGCCAGAAGTTAAGGCATCAGAAGATGCCAAATTCGCTTCATTGCTTGATAGCCTCATGTTTGTTCATGATGGAAGAGAAAGAACTGAGAAAGAGTATGAGTTTTTGTGCAAAACCTCTGGATTTTCTGGGTTCAAAGTTGCTTCTCGTCCCTTCTCTGTTTTGGGAGTCATGgaattttacaaataa 1008 0.4097 MSAMILCFTQIQSGAINAAIELNIFDIIANKSNINNGRHVSATEVASELPASARHQNLVPKLDRLLRLLANHSLLTCSYGAANGDGDSQGERLYGISSVGKFFVSGNETKGGYVALSSLFLSYGALLDTWLNFKNAIIDEDADIFQKIHGIPFYQFSNKDPKLNTLFNKSMGNLSFTMMKKLLEVYKGFEGISTLVDVGGGTGRNISMVISKYPSIKGIEHIGGDMFEGVPKGDAIMLKNVLHNWWDENSIKILKKCHEALPENGKVIVVEFIMPEVKASEDAKFASLLDSLMFVHDGRERTEKEYEFLCKTSGFSGFKVASRPFSVLGVMEFYK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2280 335 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 3 335 - -
Sto4g2280 335 PANTHER O-METHYLTRANSFERASE 3 335 IPR016461 GO:0008168
Sto4g2280 335 PIRSF O-mtase 1 220 IPR016461 GO:0008168
Sto4g2280 335 PIRSF O-mtase 217 335 IPR016461 GO:0008168
Sto4g2280 335 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 333 IPR029063 -
Sto4g2280 335 CDD AdoMet_MTases 194 274 - -
Sto4g2280 335 Gene3D - 15 182 IPR036388 -
Sto4g2280 335 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 4 335 IPR016461 GO:0008168
Sto4g2280 335 SUPERFAMILY "Winged helix" DNA-binding domain 3 107 IPR036390 -
Sto4g2280 335 Gene3D Vaccinia Virus protein VP39 164 321 IPR029063 -
Sto4g2280 335 Pfam Dimerisation domain 16 70 IPR012967 GO:0046983
Sto4g2280 335 Pfam O-methyltransferase domain 218 316 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2280 Sto-Chr4 24196853 24200897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2280 3 327 Monolignol Biosynthesis Gene Families AT5G54160 41.739 7.12e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2280 - - ag:AAB48059 336.65